RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CAND2O75155 1236 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 NCAM1P13591 858 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RAP1GAPP47736 663 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ST8SIA6P61647 398 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KCNB1Q14721 858 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PTRHD1Q6GMV3 140 aaKnown RBP14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PLD3Q8IV08 490 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ELMO3Q96BJ8 720 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ERLEC1Q96DZ1 483 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MRPL1Q9BYD6 325 aaKnown RBP14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 DOLKQ9UPQ8 538 aa14.2□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RPS6KA5O75582 802 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 GYS1P13807 737 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 COG2Q14746 738 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KYNUQ16719 465 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 DENND5BQ6ZUT9 1274 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CNBD2Q96M20 576 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PRDM15P57071 1507 aaPredicted RBP14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 UBE2Q2LH0YL09 131 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PSMD14O00487 310 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 WDR47O94967 919 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ITGA4P13612 1032 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 NBPF9Q3BBW0 867 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SGMS1Q86VZ5 419 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SEC16BQ96JE7 1060 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SELENONQ9NZV5 590 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ZNF263O14978 683 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ENDOD1O94919 500 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RFX3P48380 749 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 AP3M2P53677 418 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TAF1CQ15572 869 aaPredicted RBP14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CAPRIN2Q6IMN6 1127 aaKnown RBP14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RAB42Q8N4Z0 105 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CCT8L2Q96SF2 557 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SLC39A10Q9ULF5 831 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 NCAPD2Q15021 1401 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ALDH1A1P00352 501 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ITGB3P05106 788 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 HNRNPCP07910 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ARL4DP49703 201 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TMEM154Q6P9G4 183 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MTHFD1LQ6UB35 978 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 EME1Q96AY2 570 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 WNK4Q96J92 1243 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ZNF70Q9UC06 446 aaPredicted RBP14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TRIM66O15016 1216 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CHRM3P20309 590 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TRPC1P48995 793 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 NPEPPSP55786 919 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CCDC81Q6ZN84 652 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 EPB41L4AQ9HCS5 686 aaPredicted RBP14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SLC30A1Q9Y6M5 507 aa14.19□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PBLDP30039 288 aaPredicted RBP14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ARHGEF7Q14155 803 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SGSM1Q2NKQ1 1148 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CCDC157Q569K6 752 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 C10orf120Q5SQS8 335 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 JAMLQ86YT9 394 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ZC3H15Q8WU90 426 aaKnown RBP14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SCFD1Q8WVM8 642 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ZIM3Q96PE6 472 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 C7orf25Q9BPX7 421 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RERGLQ9H628 205 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ABI2Q9NYB9 513 aaPredicted RBP14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CFAP73A6NFT4 308 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 AGTP01019 485 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TAL1P17542 331 aaPredicted RBP14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MAGEA4P43358 317 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SEC24CP53992 1094 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 HORMAD1Q86X24 394 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 DNAAF5Q86Y56 855 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 GPBP1L1Q9HC44 474 aaPredicted RBP14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MORC2Q9Y6X9 1032 aaPredicted RBP14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PNPLA7Q6ZV29 1317 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TMEM120BA0PK00 339 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SPTLC1O15269 473 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TBC1D4O60343 1298 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CST8O60676 142 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 IMPDH2P12268 514 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CASP4P49662 377 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MRPS15P82914 257 aaKnown RBP14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 NR1I3Q14994 352 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CCDC142Q17RM4 750 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PKD2L2Q9NZM6 624 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 HERC5Q9UII4 1024 aaKnown RBP14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SH3BP1Q9Y3L3 701 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CCDC159P0C7I6 412 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TTC39BQ5VTQ0 682 aaPredicted RBP14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 LINC00116Q8NCU8 138 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ZNF280CQ8ND82 737 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 C1orf131Q8NDD1 294 aaKnown RBP14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MED15Q96RN5 788 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 UNKQ9C0B0 810 aaKnown RBP14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SYTL2Q9HCH5 934 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RAD18Q9NS91 495 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 NAGPAQ9UK23 515 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 KCNH4Q9UQ05 1017 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PDHBP11177 359 aa14.18□□□□□ -0.14
CHRFAM7A-201ENST00000299847 GPD1P21695 349 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms