RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 PCDHB7Q9Y5E2 793 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 OBSL1O75147 1896 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 EYSQ5T1H1 3165 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 NOTCH4Q99466 2003 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 SMIM28A0A1B0GU29 152 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 A0A1W2PPC1 479 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 LINC01553A4QN01 128 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 PSMA7O14818 248 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 PPEF2O14830 753 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 CALUO43852 315 aaPredicted RBP6.4□□□□□ -1.38
SSX3-201ENST00000298396 POMCP01189 267 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 ITGB1P05556 798 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 CA3P07451 260 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 KCNE1P15382 129 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 RHOQP17081 205 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 NR2F2P24468 414 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 PBX3P40426 434 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 MATR3P43243 847 aaKnown RBP eCLIP6.4□□□□□ -1.38
SSX3-201ENST00000298396 PLA2G4AP47712 749 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 SNRPFP62306 86 aaKnown RBP6.4□□□□□ -1.38
SSX3-201ENST00000298396 DLG4P78352 724 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 TAP1Q03518 808 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 NCBP1Q09161 790 aaKnown RBP6.4□□□□□ -1.38
SSX3-201ENST00000298396 PAK1Q13153 545 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 LBRQ14739 615 aaKnown RBP6.4□□□□□ -1.38
SSX3-201ENST00000298396 NCAPHQ15003 741 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 ZBTB6Q15916 424 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 SNRNP35Q16560 246 aaKnown RBP6.4□□□□□ -1.38
SSX3-201ENST00000298396 STX1AQ16623 288 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 SKOR2Q2VWA4 1001 aaPredicted RBP6.4□□□□□ -1.38
SSX3-201ENST00000298396 LRIT3Q3SXY7 679 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 ANO6Q4KMQ2 910 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 NOMO2Q5JPE7 1267 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 JADE1Q6IE81 842 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 SLFN12LQ6IEE8 588 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 FOXR2Q6PJQ5 311 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 HS2ST1Q7LGA3 356 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 TMEM173Q86WV6 379 aaPredicted RBP6.4□□□□□ -1.38
SSX3-201ENST00000298396 COLGALT2Q8IYK4 626 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 CMTR2Q8IYT2 770 aaKnown RBP6.4□□□□□ -1.38
SSX3-201ENST00000298396 MLKLQ8NB16 471 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 XXYLT1Q8NBI6 393 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 OR5B17Q8NGF7 314 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 RABGGTAQ92696 567 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 ACAP3Q96P50 834 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 POP1Q99575 1024 aaKnown RBP6.4□□□□□ -1.38
SSX3-201ENST00000298396 RAD9AQ99638 391 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 TCHPQ9BT92 498 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 VN1R3Q9BXE9 311 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 TRIM6Q9C030 488 aaPredicted RBP6.4□□□□□ -1.38
SSX3-201ENST00000298396 NRDE2Q9H7Z3 1164 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 PDE11AQ9HCR9 933 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 TIMMDC1Q9NPL8 285 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 CGNQ9P2M7 1197 aaKnown RBP6.4□□□□□ -1.38
SSX3-201ENST00000298396 TUBGCP4Q9UGJ1 667 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 RWDD2AQ9UIY3 292 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 LRFN2Q9ULH4 789 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 PCDHA11Q9Y5I1 949 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 PATJQ8NI35 1801 aa6.4□□□□□ -1.38
SSX3-201ENST00000298396 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 LRRIQ3A6PVS8 624 aaPredicted RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 KIAA0391O15091 583 aaKnown RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 MAPK13O15264 365 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 LRRN2O75325 713 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 EFEMP2O95967 443 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 F11P03951 625 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 THBS1P07996 1170 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 TRIM49P0CI25 452 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 TRIM49CP0CI26 452 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 MSX1P28360 303 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 SLC11A1P49279 550 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 SMAD3P84022 425 aaKnown RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 POU5F1Q01860 360 aaKnown RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 LRRC63Q05C16 580 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 GRIK3Q13003 919 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 ADAM9Q13443 819 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 UBAP2LQ14157 1087 aaKnown RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 MYBPC2Q14324 1141 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 PSMD6Q15008 389 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 IQCB1Q15051 598 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 GLB1LQ6UWU2 654 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 DHX40Q8IX18 779 aaKnown RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 COLGALT1Q8NBJ5 622 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 C3orf58Q8NDZ4 430 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 GOLGA5Q8TBA6 731 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 PARD3BQ8TEW8 1205 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 PGBD4Q96DM1 585 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 YME1L1Q96TA2 773 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 CGRRF1Q99675 332 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 C17orf80Q9BSJ5 609 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 CCDC94Q9BW85 323 aaPredicted RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 GTPBP4Q9BZE4 634 aaKnown RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 MTIF3Q9H2K0 278 aaKnown RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 TTYH1Q9H313 450 aaPredicted RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 RPF1Q9H9Y2 349 aaKnown RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 SAMSN1Q9NSI8 373 aaKnown RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 MARCH5Q9NX47 278 aa6.39□□□□□ -1.39
SSX3-201ENST00000298396 RBAKQ9NYW8 714 aaPredicted RBP6.39□□□□□ -1.39
SSX3-201ENST00000298396 SIX4Q9UIU6 781 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms