RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 CD58P19256 250 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 RAP1GAPP47736 663 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 INCA1Q0VD86 236 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 SPA17Q15506 151 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 UPP1Q16831 310 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 MFSD5Q6N075 450 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 ZNF662Q6ZS27 426 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 VPS36Q86VN1 386 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 WHAMMQ8TF30 809 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 ATRIPQ8WXE1 791 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 NAGPAQ9UK23 515 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 INPP5FQ9Y2H2 1132 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 PCDHA13Q9Y5I0 950 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 SNX9Q9Y5X1 595 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 IGFBP6P24592 240 aaPredicted RBP26.32■■□□□ 1.8
GTF2A1-201ENST00000298173 CLCNKBP51801 687 aa26.32■■□□□ 1.8
GTF2A1-201ENST00000298173 TUSC3Q13454 348 aa26.32■■□□□ 1.8
GTF2A1-201ENST00000298173 GLYCTKQ8IVS8 523 aa26.32■■□□□ 1.8
GTF2A1-201ENST00000298173 PRDM5Q9NQX1 630 aaPredicted RBP26.32■■□□□ 1.8
GTF2A1-201ENST00000298173 CILPO75339 1184 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 IPO7O95373 1038 aaKnown RBP26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 RAG1P15918 1043 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 TNFAIP3P21580 790 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 PDE6CP51160 858 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 CDR2Q01850 454 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 IKBKEQ14164 716 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 SOWAHAQ2M3V2 549 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 SV2CQ496J9 727 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 NOMO2Q5JPE7 1267 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 ZNF677Q86XU0 584 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 DDX27Q96GQ7 796 aaKnown RBP26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 KANSL3Q9P2N6 904 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 CACNG4Q9UBN1 327 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 LTBP2Q14767 1821 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 PODXLO00592 558 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 FMO1Q01740 532 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 DSC1Q08554 894 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 RPUSD2Q8IZ73 545 aaKnown RBP26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 TTC39CQ8N584 583 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 MMS19Q96T76 1030 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 PAAF1Q9BRP4 392 aa26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 BARX2Q9UMQ3 279 aaPredicted RBP26.31■■□□□ 1.8
GTF2A1-201ENST00000298173 CALCAP01258 141 aa26.3■■□□□ 1.8
GTF2A1-201ENST00000298173 CSF2RAP15509 400 aa26.3■■□□□ 1.8
GTF2A1-201ENST00000298173 ARHGAP25P42331 645 aa26.3■■□□□ 1.8
GTF2A1-201ENST00000298173 MAGEA1P43355 309 aa26.3■■□□□ 1.8
GTF2A1-201ENST00000298173 VAV2P52735 878 aa26.3■■□□□ 1.8
GTF2A1-201ENST00000298173 C10orf76Q5T2E6 689 aa26.3■■□□□ 1.8
GTF2A1-201ENST00000298173 ALKBH5Q6P6C2 394 aaKnown RBP26.3■■□□□ 1.8
GTF2A1-201ENST00000298173 UROC1Q96N76 676 aa26.3■■□□□ 1.8
GTF2A1-201ENST00000298173 PCDHB18PQ96TA0 734 aa26.3■■□□□ 1.8
GTF2A1-201ENST00000298173 RCCD1A6NED2 376 aa26.29■■□□□ 1.8
GTF2A1-201ENST00000298173 CASTOR2A6NHX0 329 aa26.29■■□□□ 1.8
GTF2A1-201ENST00000298173 TACC1O75410 805 aa26.29■■□□□ 1.8
GTF2A1-201ENST00000298173 MMEP08473 750 aa26.29■■□□□ 1.8
GTF2A1-201ENST00000298173 AARSP49588 968 aaKnown RBP eCLIP26.29■■□□□ 1.8
GTF2A1-201ENST00000298173 RAD23BP54727 409 aa26.29■■□□□ 1.8
GTF2A1-201ENST00000298173 CD300LGQ6UXG3 332 aa26.29■■□□□ 1.8
GTF2A1-201ENST00000298173 DPH6Q7L8W6 267 aa26.29■■□□□ 1.8
GTF2A1-201ENST00000298173 PALB2Q86YC2 1186 aa26.29■■□□□ 1.8
GTF2A1-201ENST00000298173 TMEM199Q8N511 208 aa26.29■■□□□ 1.8
GTF2A1-201ENST00000298173 C3orf58Q8NDZ4 430 aa26.29■■□□□ 1.8
GTF2A1-201ENST00000298173 CASD1Q96PB1 797 aa26.29■■□□□ 1.8
GTF2A1-201ENST00000298173 TBC1D13Q9NVG8 400 aa26.29■■□□□ 1.8
GTF2A1-201ENST00000298173 RNF216Q9NWF9 866 aaPredicted RBP26.29■■□□□ 1.8
GTF2A1-201ENST00000298173 GOLGA6L9A6NEM1 432 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 DDHD2O94830 711 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 ABL1P00519 1130 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 FAM163BP0C2L3 166 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 GNA15P30679 374 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 ZNF394Q53GI3 561 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 TAF3Q5VWG9 929 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 ZNF280BQ86YH2 543 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 NPAS4Q8IUM7 802 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 URGCPQ8TCY9 931 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 ZNF606Q8WXB4 792 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 TWNKQ96RR1 684 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 MRPL45Q9BRJ2 306 aaKnown RBP26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 LACRTQ9GZZ8 138 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 LRFN2Q9ULH4 789 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 FNDC1Q4ZHG4 1894 aaPredicted RBP26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 ABHD14A-ACY1A0A1B0GW23 586 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 PJA2O43164 708 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 B4GALT3O60512 393 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 PAEPP09466 180 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 CCDC122Q5T0U0 273 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 NYAP1Q6ZVC0 841 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 TOP6BLQ8N6T0 577 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 SLC4A11Q8NBS3 891 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 ZSWIM1Q9BR11 485 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 ELOVL4Q9GZR5 314 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 HMGXB4Q9UGU5 601 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 TFR2Q9UP52 801 aa26.28■■□□□ 1.8
GTF2A1-201ENST00000298173 HOXA2O43364 376 aa26.27■■□□□ 1.8
GTF2A1-201ENST00000298173 GZMAP12544 262 aa26.27■■□□□ 1.8
GTF2A1-201ENST00000298173 COLGALT2Q8IYK4 626 aa26.27■■□□□ 1.8
GTF2A1-201ENST00000298173 KBTBD7Q8WVZ9 684 aa26.27■■□□□ 1.8
GTF2A1-201ENST00000298173 NME7Q9Y5B8 376 aa26.27■■□□□ 1.8
GTF2A1-201ENST00000298173 PFKMP08237 780 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms