RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 KRT82Q9NSB4 513 aa10.83□□□□□ -0.67
LMX1A-201ENST00000294816 HSPBP1Q9NZL4 362 aa10.83□□□□□ -0.67
LMX1A-201ENST00000294816 SENP1Q9P0U3 644 aa10.83□□□□□ -0.67
LMX1A-201ENST00000294816 KANSL3Q9P2N6 904 aa10.83□□□□□ -0.67
LMX1A-201ENST00000294816 STX18Q9P2W9 335 aaKnown RBP10.83□□□□□ -0.67
LMX1A-201ENST00000294816 STK24Q9Y6E0 443 aa10.83□□□□□ -0.67
LMX1A-201ENST00000294816 DDX60LQ5H9U9 1706 aaKnown RBP10.83□□□□□ -0.68
LMX1A-201ENST00000294816 TXNDC9O14530 226 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 HLA-DOAP06340 250 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 RTP1P59025 263 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 CENPCQ03188 943 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 WDR72Q3MJ13 1102 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 ATP13A4Q4VNC1 1196 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 PLEKHO2Q8TD55 490 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 ACSF2Q96CM8 615 aaPredicted RBP10.83□□□□□ -0.68
LMX1A-201ENST00000294816 TTC25Q96NG3 672 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 NT5C1BQ96P26 610 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 FNBP1Q96RU3 617 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 NDE1Q9NXR1 346 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 EURLQ9NYK6 297 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 LARSQ9P2J5 1176 aaKnown RBP10.83□□□□□ -0.68
LMX1A-201ENST00000294816 PPARGC1AQ9UBK2 798 aaKnown RBP10.83□□□□□ -0.68
LMX1A-201ENST00000294816 SEL1LQ9UBV2 794 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 DNPEPQ9ULA0 475 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 RPL26L1Q9UNX3 145 aaKnown RBP10.83□□□□□ -0.68
LMX1A-201ENST00000294816 MROH7Q68CQ1 1323 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 SGK1O00141 431 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 FCHO1O14526 889 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 MYL2P10916 166 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 SHMT1P34896 483 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 SREBF1P36956 1147 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 NOVP48745 357 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 TAS2R40P59535 323 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 CCNG2Q16589 344 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 CTC1Q2NKJ3 1217 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 MOXD1Q6UVY6 613 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 CENPUQ71F23 418 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 PTPRN2Q92932 1015 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 ITFG2Q969R8 447 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 NACC1Q96RE7 527 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 FIZ1Q96SL8 496 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 THTPAQ9BU02 230 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 TLE6Q9H808 572 aa10.83□□□□□ -0.68
LMX1A-201ENST00000294816 DMAP1Q9NPF5 467 aaPredicted RBP10.83□□□□□ -0.68
LMX1A-201ENST00000294816 IGKV6D-41A0A0C4DH26 115 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 ABHD2P08910 425 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 KITP10721 976 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 PYGBP11216 843 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 NSFP46459 744 aaKnown RBP10.82□□□□□ -0.68
LMX1A-201ENST00000294816 CACNB3P54284 484 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 TFDP1Q14186 410 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 ISLR2Q6UXK2 745 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 CEP128Q6ZU80 1094 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 CBWD2Q8IUF1 395 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 CCDC110Q8TBZ0 833 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 GATA6Q92908 595 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 VTI1AQ96AJ9 217 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 OPTNQ96CV9 577 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 IFT43Q96FT9 208 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 DDX27Q96GQ7 796 aaKnown RBP10.82□□□□□ -0.68
LMX1A-201ENST00000294816 HSD17B14Q9BPX1 270 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 CENPKQ9BS16 269 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 TUBB6Q9BUF5 446 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 ASCC2Q9H1I8 757 aaPredicted RBP10.82□□□□□ -0.68
LMX1A-201ENST00000294816 WRAP73Q9P2S5 460 aaPredicted RBP10.82□□□□□ -0.68
LMX1A-201ENST00000294816 ZNF212Q9UDV6 495 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 MYH14Q7Z406 1995 aaKnown RBP10.82□□□□□ -0.68
LMX1A-201ENST00000294816 CCDC160A6NGH7 325 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 DNALI1O14645 258 aaPredicted RBP10.82□□□□□ -0.68
LMX1A-201ENST00000294816 GNPATO15228 680 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 FOSP01100 380 aaPredicted RBP10.82□□□□□ -0.68
LMX1A-201ENST00000294816 BGNP21810 368 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 TM4SF1P30408 202 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 DSG1Q02413 1049 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 C1orf146Q5VVC0 180 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 RGS9BPQ6ZS82 235 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 ALYREFQ86V81 257 aaKnown RBP10.82□□□□□ -0.68
LMX1A-201ENST00000294816 PYROXD1Q8WU10 500 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 LXNQ9BS40 222 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 C10orf88Q9H8K7 445 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 GINM1Q9NU53 330 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 TYROBPO43914 113 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 FDX1P10109 184 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 PRELPP51888 382 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 HSPA2P54652 639 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 ARL4CP56559 192 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 DYNLT1P63172 113 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 CDK16Q00536 496 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 GABPAQ06546 454 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 GRAPQ13588 217 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 TCEAL1Q15170 157 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 NFIL3Q16649 462 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 CLEC16AQ2KHT3 1053 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 BBS9Q3SYG4 887 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 CCDC174Q6PII3 467 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 PADI6Q6TGC4 694 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 OTOP1Q7RTM1 612 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 RHOT1Q8IXI2 618 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 HIPK4Q8NE63 616 aa10.82□□□□□ -0.68
LMX1A-201ENST00000294816 GRAPLQ8TC17 118 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms