RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 TOM1L1O75674 476 aa16.77■□□□□ 0.27
NCKIPSD-201ENST00000294129 PIGRP01833 764 aa16.77■□□□□ 0.27
NCKIPSD-201ENST00000294129 ABCD1P33897 745 aa16.77■□□□□ 0.27
NCKIPSD-201ENST00000294129 ZNF568Q3ZCX4 644 aa16.77■□□□□ 0.27
NCKIPSD-201ENST00000294129 GPAT2Q6NUI2 795 aa16.77■□□□□ 0.27
NCKIPSD-201ENST00000294129 TMEM192Q8IY95 271 aa16.77■□□□□ 0.27
NCKIPSD-201ENST00000294129 GPC2Q8N158 579 aa16.77■□□□□ 0.27
NCKIPSD-201ENST00000294129 TAB3Q8N5C8 712 aaPredicted RBP16.77■□□□□ 0.27
NCKIPSD-201ENST00000294129 C12orf50Q8NA57 414 aaPredicted RBP16.77■□□□□ 0.27
NCKIPSD-201ENST00000294129 FEZF2Q8TBJ5 459 aa16.77■□□□□ 0.27
NCKIPSD-201ENST00000294129 POLIQ9UNA4 740 aa16.77■□□□□ 0.27
NCKIPSD-201ENST00000294129 MEFVO15553 781 aaPredicted RBP16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 ECM2O94769 699 aaPredicted RBP16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 KRT1P04264 644 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 GBP1P32455 592 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 Q3C1V9 767 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 SH3D19Q5HYK7 790 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 FBXW10Q5XX13 1052 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 TXNRD3NBQ6F5E7 133 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 CAPN12Q6ZSI9 719 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 ZBTB8OSQ8IWT0 167 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 DCPSQ96C86 337 aaKnown RBP16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 C9orf72Q96LT7 481 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 XPO6Q96QU8 1125 aaKnown RBP16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 ZSCAN5DPP0CG00 497 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 CREB1P16220 341 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 ZNF699Q32M78 642 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 EEF1DP3Q658K8 133 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 CYP4F22Q6NT55 531 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 DNAJC24Q6P3W2 148 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 CABS1Q96KC9 395 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 RUNDC3BQ96NL0 473 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 PDGFCQ9NRA1 345 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 PARVAQ9NVD7 372 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 TJP2Q9UDY2 1190 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 IVNS1ABPQ9Y6Y0 642 aa16.76■□□□□ 0.27
NCKIPSD-201ENST00000294129 ASS1P00966 412 aaKnown RBP16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 GTF2A1P52655 376 aaPredicted RBP16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 DYNLT1P63172 113 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 DUOXA2Q1HG44 320 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 TRIM72Q6ZMU5 477 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 MICALCLQ6ZW33 695 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 DHX37Q8IY37 1157 aaKnown RBP16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 TFAP2BQ92481 460 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 ACO2Q99798 780 aaKnown RBP16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 PRMT1Q99873 361 aaKnown RBP16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 TMEM134Q9H6X4 195 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 INTS9Q9NV88 658 aaKnown RBP16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 ETS1P14921 441 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 CDH8P55286 799 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 PTP4A2Q12974 167 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 AUHQ13825 339 aaKnown RBP16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 SMTNL2Q2TAL5 461 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 C6orf118Q5T5N4 469 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 ANKRD42Q8N9B4 389 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 GLIS1Q8NBF1 620 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 ATL2Q8NHH9 583 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 GPR20Q99678 358 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 SCINQ9Y6U3 715 aa16.75■□□□□ 0.27
NCKIPSD-201ENST00000294129 CXCL8P10145 99 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 PLCB3Q01970 1234 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 FAM182AQ5T1J6 154 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 PLEKHA7Q6IQ23 1121 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 PHF13Q86YI8 300 aaPredicted RBP16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 MRRFQ96E11 262 aaKnown RBP16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 ZNF148Q9UQR1 794 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 OGTO15294 1046 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 VIMP08670 466 aaKnown RBP16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 MMP8P22894 467 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 OGDHQ02218 1023 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 IZUMO3Q5VZ72 239 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 MFSD7Q6UXD7 560 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 WDR49Q8IV35 697 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 GRK7Q8WTQ7 553 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 PGM2Q96G03 612 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 SEC16BQ96JE7 1060 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 NIF3L1Q9GZT8 377 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 ADAM7Q9H2U9 754 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 C10orf88Q9H8K7 445 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 KCNK9Q9NPC2 374 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 WHRNQ9P202 907 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 DNPEPQ9ULA0 475 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 LRRD1A4D1F6 860 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 PSTPIP1O43586 416 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 IFNB1P01574 187 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 EDNRBP24530 442 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 IVDP26440 423 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 EFNA5P52803 228 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 NFX1Q12986 1120 aaKnown RBP16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 MTM1Q13496 603 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 KCTD2Q14681 263 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 P3H1Q32P28 736 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 SPDYCQ5MJ68 293 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 IER5Q5VY09 327 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 ZPBP2Q6X784 338 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 DYDC1Q8WWB3 177 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 MAIP1Q8WWC4 291 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 ADAM33Q9BZ11 813 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 FHDC1Q9C0D6 1143 aaPredicted RBP16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 MINDY3Q9H8M7 445 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms