RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ZNF189O75820 626 aaPredicted RBP16.86■□□□□ 0.29
SSRP1-202ENST00000293880 KCTD21Q4G0X4 260 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 PIF1Q9H611 641 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 SOX13Q9UN79 622 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 PRKCBP05771 671 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 ZCCHC18P0CG32 403 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 ST13P50502 369 aaKnown RBP16.86■□□□□ 0.29
SSRP1-202ENST00000293880 ALDH6A1Q02252 535 aaKnown RBP16.86■□□□□ 0.29
SSRP1-202ENST00000293880 DNAL1Q4LDG9 190 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 HAUS6Q7Z4H7 955 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 AGGF1Q8N302 714 aaeCLIP16.86■□□□□ 0.291e-7■□□□□ 9.5
SSRP1-202ENST00000293880 EPS8L3Q8TE67 593 aaKnown RBP16.86■□□□□ 0.29
SSRP1-202ENST00000293880 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.86■□□□□ 0.29
SSRP1-202ENST00000293880 SGF29Q96ES7 293 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 CNDP1Q96KN2 507 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 FAM167AQ96KS9 214 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 APEX2Q9UBZ4 518 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 AGAP1Q9UPQ3 857 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 FAM32AQ9Y421 112 aaKnown RBP16.86■□□□□ 0.29
SSRP1-202ENST00000293880 A0A1B0GW55 424 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 DUX4L2P0CJ85 424 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 DUX4L3P0CJ86 424 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 DUX4L4P0CJ87 422 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 DUX4L5P0CJ88 424 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 DUX4L6P0CJ89 424 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 DUX4L7P0CJ90 424 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 FXR1P51114 621 aaKnown RBP eCLIP16.86■□□□□ 0.29
SSRP1-202ENST00000293880 FAXCQ5TGI0 409 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 DUX4Q9UBX2 424 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 SCAF8Q9UPN6 1271 aaKnown RBP16.86■□□□□ 0.29
SSRP1-202ENST00000293880 PCP4L1A6NKN8 68 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 RNF103O00237 685 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 ATP2C1P98194 919 aaPredicted RBP16.85■□□□□ 0.29
SSRP1-202ENST00000293880 DSG1Q02413 1049 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 ARHGAP17Q68EM7 881 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 GIMAP8Q8ND71 665 aaPredicted RBP16.85■□□□□ 0.29
SSRP1-202ENST00000293880 ARHGEF26Q96DR7 871 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 RPAP3Q9H6T3 665 aaPredicted RBP16.85■□□□□ 0.29
SSRP1-202ENST00000293880 PRR36Q9H6K5 1346 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 HNRNPH1P31943 449 aaKnown RBP16.85■□□□□ 0.29
SSRP1-202ENST00000293880 PLA2G4FQ68DD2 849 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 CCNI2Q6ZMN8 369 aaPredicted RBP16.85■□□□□ 0.29
SSRP1-202ENST00000293880 CDH24Q86UP0 819 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 CLEC10AQ8IUN9 316 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 KCNB2Q92953 911 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 OTUD5Q96G74 571 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 DYRK4Q9NR20 520 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 H2AFY2Q9P0M6 372 aaPredicted RBP16.85■□□□□ 0.29
SSRP1-202ENST00000293880 RALAP11233 206 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 GNAT1P11488 350 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 WDR72Q3MJ13 1102 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 HS6ST3Q8IZP7 471 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 NSUN6Q8TEA1 469 aaKnown RBP16.85■□□□□ 0.29
SSRP1-202ENST00000293880 MXD3Q9BW11 206 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 HAO1Q9UJM8 370 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 PTCH1Q13635 1447 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 CDK17Q00537 523 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 DPYDQ12882 1025 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 STOX1Q6ZVD7 989 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 FAM136AQ96C01 138 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 NMD3Q96D46 503 aaKnown RBP16.85■□□□□ 0.29
SSRP1-202ENST00000293880 CTSHP09668 335 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 KRT76Q01546 638 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 MEI1Q5TIA1 1274 aa16.85■□□□□ 0.29
SSRP1-202ENST00000293880 FOXP4Q8IVH2 680 aaPredicted RBP16.85■□□□□ 0.29
SSRP1-202ENST00000293880 RGS5O15539 181 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 TPD52L2O43399 206 aaKnown RBP16.84■□□□□ 0.29
SSRP1-202ENST00000293880 CLK1P49759 484 aaKnown RBP16.84■□□□□ 0.29
SSRP1-202ENST00000293880 ATP1A4Q13733 1029 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 RCN1Q15293 331 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 MAPRE1Q15691 268 aaKnown RBP16.84■□□□□ 0.29
SSRP1-202ENST00000293880 RAD9BQ6WBX8 426 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 MAP3K6O95382 1288 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 GUCA1CO95843 209 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 COMTP21964 271 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 MAGEA4P43358 317 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 KYNUQ16719 465 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 GOLGA7BQ2TAP0 167 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 JAMLQ86YT9 394 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 TTLL6Q8N841 843 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 HECW2Q9P2P5 1572 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 H7C1W4 665 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 EIF2B2P49770 351 aaKnown RBP16.84■□□□□ 0.29
SSRP1-202ENST00000293880 DEFA1P59665 94 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 DEFA3P59666 94 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 TTLL4Q14679 1199 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 AHI1Q8N157 1196 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 CELF1Q92879 486 aaKnown RBP16.84■□□□□ 0.29
SSRP1-202ENST00000293880 SMG5Q9UPR3 1016 aaKnown RBP16.84■□□□□ 0.29
SSRP1-202ENST00000293880 CCND1P24385 295 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 MZF1P28698 734 aaPredicted RBP16.84■□□□□ 0.29
SSRP1-202ENST00000293880 TRIP4Q15650 581 aaPredicted RBP16.84■□□□□ 0.29
SSRP1-202ENST00000293880 AMHR2Q16671 573 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 BARGINQ6ZT62 677 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 DDHD1Q8NEL9 900 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 APPL2Q8NEU8 664 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 SLC7A14Q8TBB6 771 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 OSBPL10Q9BXB5 764 aa16.84■□□□□ 0.29
SSRP1-202ENST00000293880 GPBP1L1Q9HC44 474 aaPredicted RBP16.84■□□□□ 0.29
SSRP1-202ENST00000293880 SNX9Q9Y5X1 595 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms