RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ECT2Q9H8V3 914 aa18.12■□□□□ 0.49
SHANK1-201ENST00000293441 WARS2Q9UGM6 360 aaKnown RBP18.12■□□□□ 0.49
SHANK1-201ENST00000293441 YY1P25490 414 aa18.12■□□□□ 0.49
SHANK1-201ENST00000293441 EPHX2P34913 555 aa18.12■□□□□ 0.49
SHANK1-201ENST00000293441 SNX31Q8N9S9 440 aa18.12■□□□□ 0.49
SHANK1-201ENST00000293441 SLC16A10Q8TF71 515 aa18.12■□□□□ 0.49
SHANK1-201ENST00000293441 ALDH18A1P54886 795 aaKnown RBP18.11■□□□□ 0.49
SHANK1-201ENST00000293441 STAT4Q14765 748 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 TEDDM1Q5T9Z0 273 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 XRRA1Q6P2D8 792 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 LRRC1Q9BTT6 524 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 GPR63Q9BZJ6 419 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 NIF3L1Q9GZT8 377 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 AAASQ9NRG9 546 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 TBX20Q9UMR3 447 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 FXR2P51116 673 aaKnown RBP eCLIP18.11■□□□□ 0.49
SHANK1-201ENST00000293441 PTRHD1Q6GMV3 140 aaKnown RBP18.11■□□□□ 0.49
SHANK1-201ENST00000293441 CD274Q9NZQ7 290 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 STX18Q9P2W9 335 aaKnown RBP18.11■□□□□ 0.49
SHANK1-201ENST00000293441 SUPT3HB4E1H0 165 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 SUPT3HO75486 399 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 POLE2P56282 527 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 GJB7Q6PEY0 223 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 A0A1B0GTH6 734 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 EFHC1Q5JVL4 640 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 TSPAN17Q96FV3 270 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 ATP6V1G3Q96LB4 118 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 COLEC11Q9BWP8 271 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 TRABDQ9H4I3 376 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 H0Y626 953 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 FBXO16Q8IX29 292 aaPredicted RBP18.11■□□□□ 0.49
SHANK1-201ENST00000293441 ENTPD7Q9NQZ7 604 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 TRIM10Q9UDY6 481 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 PCDHB2Q9Y5E7 798 aa18.11■□□□□ 0.49
SHANK1-201ENST00000293441 ANKRD65E5RJM6 399 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 SNX12Q9UMY4 172 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 SNX5Q9Y5X3 404 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 PPRC1Q5VV67 1664 aaKnown RBP18.1■□□□□ 0.49
SHANK1-201ENST00000293441 MSH4O15457 936 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 VTNP04004 478 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 USP49Q70CQ1 688 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 SPATA18Q8TC71 538 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 SLC37A4O43826 429 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 PFDN1O60925 122 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 RALBP11234 206 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 WASHC5Q12768 1159 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 ORC1Q13415 861 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 ZRANB3Q5FWF4 1079 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 CPB2Q96IY4 423 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 PRMT1Q99873 361 aaKnown RBP18.1■□□□□ 0.49
SHANK1-201ENST00000293441 DLC1Q96QB1 1528 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 GPR182O15218 404 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 STAG3L1P0CL83 205 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 HSPA9P38646 679 aaKnown RBP18.1■□□□□ 0.49
SHANK1-201ENST00000293441 KRT72Q14CN4 511 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 PRR23AA6NEV1 266 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 TASP1Q9H6P5 420 aa18.1■□□□□ 0.49
SHANK1-201ENST00000293441 PNPLA4P41247 253 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 MAPRE2Q15555 327 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 MAP3K14Q99558 947 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 NEU2Q9Y3R4 380 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 EDRF1Q3B7T1 1238 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 ADGRA2Q96PE1 1338 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 SNRPFP62306 86 aaKnown RBP18.09■□□□□ 0.49
SHANK1-201ENST00000293441 PDK1Q15118 436 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 TMEM169Q96HH4 297 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 WDR24Q96S15 920 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 CHORDC1Q9UHD1 332 aaPredicted RBP18.09■□□□□ 0.49
SHANK1-201ENST00000293441 ITSN1Q15811 1721 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 CPS1P31327 1500 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 ZNF263O14978 683 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 AP2B1P63010 937 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 KCNV2Q8TDN2 545 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 CDH18Q13634 790 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 LAMB3Q13751 1172 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 LONRF1Q17RB8 773 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 RBM15Q96T37 977 aaKnown RBP eCLIP18.09■□□□□ 0.49
SHANK1-201ENST00000293441 CHMP2BQ9UQN3 213 aa18.09■□□□□ 0.49
SHANK1-201ENST00000293441 GYS1P13807 737 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 BYSLQ13895 437 aaKnown RBP18.08■□□□□ 0.49
SHANK1-201ENST00000293441 NAB2Q15742 525 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 NLRP14Q86W24 1093 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 ACSF2Q96CM8 615 aaPredicted RBP18.08■□□□□ 0.49
SHANK1-201ENST00000293441 EIF2AQ9BY44 585 aaKnown RBP18.08■□□□□ 0.49
SHANK1-201ENST00000293441 PCMTD2Q9NV79 361 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 RSPH10B2B2RC85 870 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 CCDC22O60826 627 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 RSPH10BP0C881 870 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 SHCBP1Q8NEM2 672 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 RUSC1Q9BVN2 902 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 CPA4Q9UI42 421 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 ANGPT2O15123 496 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 ARIH2O95376 493 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 COMTP21964 271 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 LRRC74AQ0VAA2 488 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 MTM1Q13496 603 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 FLOT2Q14254 428 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 ARHGAP18Q8N392 663 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 RDM1Q8NG50 284 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 OTUB1Q96FW1 271 aaPredicted RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms