RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 MAF1Q9H063 256 aa19.48■□□□□ 0.71
SHKBP1-201ENST00000291842 FOXO6A8MYZ6 492 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 ATF2P15336 505 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 ITIH2P19823 946 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 TRPC3Q13507 836 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 AUHQ13825 339 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 RHBDF2Q6PJF5 856 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 FGD4Q96M96 766 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 XPO6Q96QU8 1125 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 CNOT10Q9H9A5 744 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 F8VP50 259 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 INO80B-WBP1J3KQ70 363 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 OGTO15294 1046 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 KYNUQ16719 465 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 DUOXA2Q1HG44 320 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 CYP4A22Q5TCH4 519 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 GPAT2Q6NUI2 795 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 ZBTB8OSQ8IWT0 167 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 SULF1Q8IWU6 871 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 KATNAL2Q8IYT4 538 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 UBR7Q8N806 425 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 TFAP2BQ92481 460 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 SPATA33Q96N06 139 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 INO80BQ9C086 356 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 ANAPC5Q9UJX4 755 aa19.47■□□□□ 0.71
SHKBP1-201ENST00000291842 CSDE1O75534 798 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 PAEPP09466 180 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 ATF7P17544 494 aaPredicted RBP19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 MMP13P45452 471 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 ZNF252P-AS1Q0IIN9 211 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 ERMARDQ5T6L9 678 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 TXNRD3NBQ6F5E7 133 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 TMEM192Q8IY95 271 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 GRK7Q8WTQ7 553 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 DCPSQ96C86 337 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 PPP1R16BQ96T49 567 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 NXF1Q9UBU9 619 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 CPSF3Q9UKF6 684 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 SRRM3A6NNA2 597 aaPredicted RBP19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 ABLIM1O14639 778 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 CLCN3P51790 818 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 OGDHQ02218 1023 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 PLCB4Q15147 1175 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 CELF3Q5SZQ8 465 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 ZNF365Q70YC5 407 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 GSTA5Q7RTV2 222 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 CPLX4Q7Z7G2 160 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 FAM167AQ96KS9 214 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 NIF3L1Q9GZT8 377 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 CTNNAL1Q9UBT7 734 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 IVNS1ABPQ9Y6Y0 642 aa19.46■□□□□ 0.71
SHKBP1-201ENST00000291842 A0A0G2JLL6 359 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 TMEM191CA6NGB0 347 aa19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 AGTP01019 485 aa19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 TMEM191BP0C7N4 346 aa19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 RAP1GAPP47736 663 aa19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 CDR1P51861 262 aa19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 NFX1Q12986 1120 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 ORC1Q13415 861 aa19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 MXD4Q14582 209 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 ZNF568Q3ZCX4 644 aa19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 EEF1DP3Q658K8 133 aa19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 CDCA2Q69YH5 1023 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 DCUN1D2Q6PH85 259 aa19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 MICALCLQ6ZW33 695 aa19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 TRMT10CQ7L0Y3 403 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 PRRT2Q7Z6L0 340 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 WDTC1Q8N5D0 677 aa19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 PDGFCQ9NRA1 345 aa19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 IP6K2Q9UHH9 426 aa19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 POLIQ9UNA4 740 aa19.45■□□□□ 0.7
SHKBP1-201ENST00000291842 KRT19P08727 400 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 HOXC6P09630 235 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 MAN1A1P33908 653 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 MCL1Q07820 350 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 CCNG2Q16589 344 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 SGSM1Q2NKQ1 1148 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 DNAJC24Q6P3W2 148 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 DHX37Q8IY37 1157 aaKnown RBP19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 GLIS1Q8NBF1 620 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 EXD1Q8NHP7 514 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 HAUS1Q96CS2 278 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 SEC16BQ96JE7 1060 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 FAM129AQ9BZQ8 928 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 MINDY3Q9H8M7 445 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 RBPJLQ9UBG7 517 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 NEU2Q9Y3R4 380 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 KRT1P04264 644 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 IFNAR2P48551 515 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 IGBP1P78318 339 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 TTLL12Q14166 644 aaPredicted RBP19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 ZNF699Q32M78 642 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 MFSD7Q6UXD7 560 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 SPATS2Q86XZ4 545 aaKnown RBP19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 TCP11Q8WWU5 503 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 PRMT1Q99873 361 aaKnown RBP19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 TRAIPQ9BWF2 469 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 TJP2Q9UDY2 1190 aa19.44■□□□□ 0.7
SHKBP1-201ENST00000291842 MCM3APO60318 1980 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms