RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 USP17L6PQ6QN14 398 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 OPTNQ96CV9 577 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 PARVAQ9NVD7 372 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 TUBA8Q9NY65 449 aaPredicted RBP11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 USE1Q9NZ43 259 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 STK36Q9NRP7 1315 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 PP2D1A8MPX8 630 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 MAGEA8P43361 318 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 GPC3P51654 580 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 TNFAIP2Q03169 654 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 CWF19L1Q69YN2 538 aaKnown RBP11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 SYDE1Q6ZW31 735 aaPredicted RBP11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 KLF6Q99612 283 aaPredicted RBP11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 AGPAT1Q99943 283 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 DBNDD1Q9H9R9 158 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 PCMTD2Q9NV79 361 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 POLIQ9UNA4 740 aa11.25□□□□□ -0.61
PKNOX1-201ENST00000291547 EMSYQ7Z589 1322 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 CCDC78A2IDD5 438 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 RSPH10B2B2RC85 870 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 APOL1O14791 398 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 ZNF263O14978 683 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 STRNO43815 780 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 RSPH10BP0C881 870 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 CCNHP51946 323 aaPredicted RBP11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 MTMR1Q13613 665 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 STXBP2Q15833 593 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 KYNUQ16719 465 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 CCDC81Q6ZN84 652 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 ENOSF1Q7L5Y1 443 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 MINPP1Q9UNW1 487 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 POTEFA5A3E0 1075 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 KCNN4O15554 427 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 PRPF4O43172 522 aaKnown RBP eCLIP11.24□□□□□ -0.613e-7■■■□□ 19
PKNOX1-201ENST00000291547 NTSR2O95665 410 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 CSF1RP07333 972 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 POTEIP0CG38 1075 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 PTGISQ16647 500 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 Q4G0T1 1027 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 ZCWPW2Q504Y3 356 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 AARS2Q5JTZ9 985 aaKnown RBP11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 POTEGQ6S5H5 508 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 POTEEQ6S8J3 1075 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 BBS7Q8IWZ6 715 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 MTERF3Q96E29 417 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 FAM20AQ96MK3 541 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 AGAP3Q96P47 875 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 KLHL11Q9NVR0 708 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 COL14A1Q05707 1796 aaKnown RBP11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 KDELC2Q7Z4H8 507 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 GORASP1Q9BQQ3 440 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 RAB6BQ9NRW1 208 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 UTP6Q9NYH9 597 aaKnown RBP11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 SOX13Q9UN79 622 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 CHMP2BQ9UQN3 213 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 NEU2Q9Y3R4 380 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 MAGEA13PA6NCF6 341 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 SPDYE5A6NIY4 337 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 PHF2O75151 1096 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 DGKIO75912 1065 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 FCER1AP12319 257 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 CDC27P30260 824 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 STAT3P40763 770 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 USP10Q14694 798 aaKnown RBP11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 SPDYE7PQ495Y7 208 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 LAYNQ6UX15 382 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 BEST2Q8NFU1 509 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 NSL1Q96IY1 281 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 CNDP1Q96KN2 507 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 ZIM3Q96PE6 472 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 KLHL25Q9H0H3 589 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 SYBUQ9NX95 663 aa11.24□□□□□ -0.61
PKNOX1-201ENST00000291547 USP42Q9H9J4 1324 aaKnown RBP11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 ZBTB5O15062 677 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 ATP6V1G2O95670 118 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 ALBP02768 609 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 SSTR3P32745 418 aaPredicted RBP11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 SLC1A1P43005 524 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 GJA8P48165 433 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 ZNF200P98182 395 aaPredicted RBP11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 LVRNQ6Q4G3 990 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 MIGA2Q7L4E1 593 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 HEATR4Q86WZ0 1026 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 KIRREL3Q8IZU9 778 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 RBM12Q9NTZ6 932 aaKnown RBP11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 CYP26A1O43174 497 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 TPST1O60507 370 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 ARIH2O95376 493 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 KRT16P08779 473 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 ADORA2BP29275 332 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 NUP107P57740 925 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 ZNF235Q14590 738 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 SLC18A3Q16572 532 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 SHC4Q6S5L8 630 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 ATG9AQ7Z3C6 839 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 PRPF39Q86UA1 669 aaKnown RBP11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 TBC1D10CQ8IV04 446 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 TASP1Q9H6P5 420 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 H2AFY2Q9P0M6 372 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms