RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 EYSQ5T1H1 3165 aa28.93■■■□□ 2.22
SSU72-201ENST00000291386 STX10O60499 249 aa28.93■■■□□ 2.22
SSU72-201ENST00000291386 FGFR1OPO95684 399 aaKnown RBP28.93■■■□□ 2.22
SSU72-201ENST00000291386 GNA14O95837 355 aa28.93■■■□□ 2.22
SSU72-201ENST00000291386 GLUD1P00367 558 aa28.93■■■□□ 2.22
SSU72-201ENST00000291386 TRIM49P0CI25 452 aa28.93■■■□□ 2.22
SSU72-201ENST00000291386 TRIM49CP0CI26 452 aa28.93■■■□□ 2.22
SSU72-201ENST00000291386 RBM10P98175 930 aaKnown RBP28.93■■■□□ 2.22
SSU72-201ENST00000291386 DLX2Q07687 328 aaPredicted RBP28.93■■■□□ 2.22
SSU72-201ENST00000291386 PPP3CAQ08209 521 aa28.93■■■□□ 2.22
SSU72-201ENST00000291386 BIRC3Q13489 604 aa28.93■■■□□ 2.22
SSU72-201ENST00000291386 DPH6Q7L8W6 267 aa28.93■■■□□ 2.22
SSU72-201ENST00000291386 LIMS2Q7Z4I7 341 aa28.93■■■□□ 2.22
SSU72-201ENST00000291386 SPATA18Q8TC71 538 aa28.93■■■□□ 2.22
SSU72-201ENST00000291386 SYAP1Q96A49 352 aaPredicted RBP28.93■■■□□ 2.22
SSU72-201ENST00000291386 MSLNLQ96KJ4 702 aa28.93■■■□□ 2.22
SSU72-201ENST00000291386 ARMCX3Q9UH62 379 aaPredicted RBP28.93■■■□□ 2.22
SSU72-201ENST00000291386 DPP7Q9UHL4 492 aa28.93■■■□□ 2.22
SSU72-201ENST00000291386 TIMM13Q9Y5L4 95 aaPredicted RBP28.93■■■□□ 2.22
SSU72-201ENST00000291386 CDY1Q9Y6F8 540 aa28.93■■■□□ 2.22
SSU72-201ENST00000291386 PHACTR2O75167 634 aa28.92■■■□□ 2.22
SSU72-201ENST00000291386 VNN1O95497 513 aa28.92■■■□□ 2.22
SSU72-201ENST00000291386 EPCAMP16422 314 aa28.92■■■□□ 2.22
SSU72-201ENST00000291386 OR1D2P34982 312 aa28.92■■■□□ 2.22
SSU72-201ENST00000291386 MARSP56192 900 aaKnown RBP28.92■■■□□ 2.22
SSU72-201ENST00000291386 LEXMQ3ZCV2 418 aa28.92■■■□□ 2.22
SSU72-201ENST00000291386 CTXN3Q4LDR2 81 aa28.92■■■□□ 2.22
SSU72-201ENST00000291386 OVOS1Q6IE37 1185 aa28.92■■■□□ 2.22
SSU72-201ENST00000291386 ANKRD54Q6NXT1 300 aa28.92■■■□□ 2.22
SSU72-201ENST00000291386 LLGL2Q6P1M3 1020 aa28.92■■■□□ 2.22
SSU72-201ENST00000291386 TOP6BLQ8N6T0 577 aa28.92■■■□□ 2.22
SSU72-201ENST00000291386 SRRTQ9BXP5 876 aaKnown RBP28.92■■■□□ 2.22
SSU72-201ENST00000291386 XYLT2Q9H1B5 865 aa28.92■■■□□ 2.22
SSU72-201ENST00000291386 TMEM8AQ9HCN3 771 aa28.92■■■□□ 2.22
SSU72-201ENST00000291386 DZANK1Q9NVP4 752 aa28.92■■■□□ 2.22
SSU72-201ENST00000291386 BARX2Q9UMQ3 279 aaPredicted RBP28.92■■■□□ 2.22
SSU72-201ENST00000291386 ADAM12O43184 909 aa28.91■■■□□ 2.22
SSU72-201ENST00000291386 TGM5O43548 720 aa28.91■■■□□ 2.22
SSU72-201ENST00000291386 HOXB8P17481 243 aaPredicted RBP28.91■■■□□ 2.22
SSU72-201ENST00000291386 KCNA5P22460 613 aa28.91■■■□□ 2.22
SSU72-201ENST00000291386 MYL6P60660 151 aa28.91■■■□□ 2.22
SSU72-201ENST00000291386 NCOA4Q13772 614 aa28.91■■■□□ 2.22
SSU72-201ENST00000291386 SASS6Q6UVJ0 657 aa28.91■■■□□ 2.22
SSU72-201ENST00000291386 METTL23Q86XA0 190 aa28.91■■■□□ 2.22
SSU72-201ENST00000291386 TMEM86AQ8N2M4 240 aa28.91■■■□□ 2.22
SSU72-201ENST00000291386 ATXN2LQ8WWM7 1075 aaKnown RBP28.91■■■□□ 2.22
SSU72-201ENST00000291386 SNX9Q9Y5X1 595 aa28.91■■■□□ 2.22
SSU72-201ENST00000291386 OR6C75A6NL08 312 aa28.9■■■□□ 2.22
SSU72-201ENST00000291386 HUS1O60921 280 aa28.9■■■□□ 2.22
SSU72-201ENST00000291386 FAM163BP0C2L3 166 aa28.9■■■□□ 2.22
SSU72-201ENST00000291386 GCLMP48507 274 aa28.9■■■□□ 2.22
SSU72-201ENST00000291386 AAK1Q2M2I8 961 aa28.9■■■□□ 2.22
SSU72-201ENST00000291386 KRT39Q6A163 491 aa28.9■■■□□ 2.22
SSU72-201ENST00000291386 CAVIN1Q6NZI2 390 aaKnown RBP28.9■■■□□ 2.22
SSU72-201ENST00000291386 EP400NLQ6ZTU2 488 aa28.9■■■□□ 2.22
SSU72-201ENST00000291386 PALB2Q86YC2 1186 aa28.9■■■□□ 2.22
SSU72-201ENST00000291386 GLYCTKQ8IVS8 523 aa28.9■■■□□ 2.22
SSU72-201ENST00000291386 TAF4BQ92750 862 aa28.9■■■□□ 2.22
SSU72-201ENST00000291386 SLC35C1Q96A29 364 aa28.9■■■□□ 2.22
SSU72-201ENST00000291386 PLEKHA4Q9H4M7 779 aa28.9■■■□□ 2.22
SSU72-201ENST00000291386 ABLIM3O94929 683 aa28.89■■■□□ 2.22
SSU72-201ENST00000291386 SGSM1Q2NKQ1 1148 aa28.89■■■□□ 2.22
SSU72-201ENST00000291386 CCDC40Q4G0X9 1142 aa28.89■■■□□ 2.22
SSU72-201ENST00000291386 WSCD1Q658N2 575 aa28.89■■■□□ 2.22
SSU72-201ENST00000291386 PDCL2Q8N4E4 241 aa28.89■■■□□ 2.22
SSU72-201ENST00000291386 ZNF461Q8TAF7 563 aa28.89■■■□□ 2.22
SSU72-201ENST00000291386 FBXW11Q9UKB1 542 aa28.89■■■□□ 2.22
SSU72-201ENST00000291386 L1RE1Q9UN81 338 aa28.89■■■□□ 2.22
SSU72-201ENST00000291386 SPTBN5Q9NRC6 3674 aaKnown RBP28.89■■■□□ 2.22
SSU72-201ENST00000291386 PAPLNO95428 1278 aa28.88■■■□□ 2.21
SSU72-201ENST00000291386 ROR1Q01973 937 aa28.88■■■□□ 2.21
SSU72-201ENST00000291386 SOWAHAQ2M3V2 549 aa28.88■■■□□ 2.21
SSU72-201ENST00000291386 SYCE2Q6PIF2 218 aa28.88■■■□□ 2.21
SSU72-201ENST00000291386 ELMSAN1Q6PJG2 1045 aa28.88■■■□□ 2.21
SSU72-201ENST00000291386 THEM5Q8N1Q8 247 aa28.88■■■□□ 2.21
SSU72-201ENST00000291386 ANO10Q9NW15 660 aa28.88■■■□□ 2.21
SSU72-201ENST00000291386 CD207Q9UJ71 328 aa28.88■■■□□ 2.21
SSU72-201ENST00000291386 H3BQ06 376 aaPredicted RBP28.87■■■□□ 2.21
SSU72-201ENST00000291386 HLA-DRAP01903 254 aa28.87■■■□□ 2.21
SSU72-201ENST00000291386 MXI1P50539 228 aa28.87■■■□□ 2.21
SSU72-201ENST00000291386 TFF2Q03403 129 aa28.87■■■□□ 2.21
SSU72-201ENST00000291386 STX1AQ16623 288 aa28.87■■■□□ 2.21
SSU72-201ENST00000291386 SKOR2Q2VWA4 1001 aaPredicted RBP28.87■■■□□ 2.21
SSU72-201ENST00000291386 PUS10Q3MIT2 529 aaKnown RBP28.87■■■□□ 2.21
SSU72-201ENST00000291386 WDR72Q3MJ13 1102 aa28.87■■■□□ 2.21
SSU72-201ENST00000291386 DCAF17Q5H9S7 520 aaPredicted RBP28.87■■■□□ 2.21
SSU72-201ENST00000291386 TPGS2Q68CL5 300 aa28.87■■■□□ 2.21
SSU72-201ENST00000291386 RTL10Q7L3V2 364 aa28.87■■■□□ 2.21
SSU72-201ENST00000291386 TRIM59Q8IWR1 403 aa28.87■■■□□ 2.21
SSU72-201ENST00000291386 SMRP1Q8NCR6 262 aa28.87■■■□□ 2.21
SSU72-201ENST00000291386 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.87■■■□□ 2.21
SSU72-201ENST00000291386 RTP3Q9BQQ7 232 aa28.87■■■□□ 2.21
SSU72-201ENST00000291386 S1PR5Q9H228 398 aa28.87■■■□□ 2.21
SSU72-201ENST00000291386 MAN1C1Q9NR34 630 aa28.87■■■□□ 2.21
SSU72-201ENST00000291386 MAFFQ9ULX9 164 aa28.87■■■□□ 2.21
SSU72-201ENST00000291386 WDR27A2RRH5 827 aa28.86■■■□□ 2.21
SSU72-201ENST00000291386 GABRDO14764 452 aa28.86■■■□□ 2.21
SSU72-201ENST00000291386 PMM2O15305 246 aa28.86■■■□□ 2.21
SSU72-201ENST00000291386 ASS1P00966 412 aaKnown RBP28.86■■■□□ 2.21
SSU72-201ENST00000291386 CCDC192P0DO97 292 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms