RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 GNAT1P11488 350 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 TTI2Q6NXR4 508 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 ILDR1Q86SU0 546 aaPredicted RBP16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 ARID3BQ8IVW6 561 aaPredicted RBP16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 NAF1Q96HR8 494 aaKnown RBP16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 PPRC1Q5VV67 1664 aaKnown RBP16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 NEXMIFQ5QGS0 1516 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 MYL2P10916 166 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 PDAP1Q13442 181 aaKnown RBP16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 C16orf89Q6UX73 402 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 CCT7Q99832 543 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 NDFIP2Q9NV92 336 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 AGAP1Q9UPQ3 857 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 CDYLQ9Y232 598 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 PTPRMP28827 1452 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 FOXN3O00409 490 aaPredicted RBP16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 GPAT2Q6NUI2 795 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 MRPL1Q9BYD6 325 aaKnown RBP16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 FAM129AQ9BZQ8 928 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 MED24O75448 989 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 NDUFB10O96000 172 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 TPI1P60174 286 aa16.06■□□□□ 0.16
SHROOM4-201ENST00000289292 PDGFRBP09619 1106 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 PIGHQ14442 188 aaPredicted RBP16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 NLRP9Q7RTR0 991 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 PPHLN1Q8NEY8 458 aaKnown RBP16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 USP6NLQ92738 828 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 MAGEB18Q96M61 343 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 HNRNPCL2B2RXH8 293 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 MAPRE2Q15555 327 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 PCSK7Q16549 785 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 ZNF571Q7Z3V5 609 aaPredicted RBP16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 DAB1O75553 588 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 EARS2Q5JPH6 523 aaKnown RBP16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 ADCK1Q86TW2 530 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 CASS4Q9NQ75 786 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 SUGT1Q9Y2Z0 365 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 ITGA4P13612 1032 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 GFAPP14136 432 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 SERPINB5P36952 375 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 UBE3AQ05086 875 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 MEI1Q5TIA1 1274 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 THEM5Q8N1Q8 247 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 C2orf40Q9H1Z8 148 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 CDC42EP4Q9H3Q1 356 aaKnown RBP16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 TBC1D23Q9NUY8 699 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 SRP72O76094 671 aaKnown RBP16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 CYLC2Q14093 348 aaPredicted RBP16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 INPP5AQ14642 412 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 MTDHQ86UE4 582 aaKnown RBP16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 PLEKHA5Q9HAU0 1116 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 SLC13A4Q9UKG4 626 aa16.05■□□□□ 0.16
SHROOM4-201ENST00000289292 FAM205AQ6ZU69 1335 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 TRIM49D1C9J1S8 452 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 HLA-DPA1P20036 260 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 TMED10P49755 219 aaKnown RBP16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 CENPCQ03188 943 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 MTMR2Q13614 643 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 CDKAL1Q5VV42 579 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 NDUFAF2Q8N183 169 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 CLEC4FQ8N1N0 589 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 SLC20A1Q8WUM9 679 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 KAZALD1Q96I82 304 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 ZNF512BQ96KM6 892 aaPredicted RBP16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 TOPORSQ9NS56 1045 aaPredicted RBP16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 SNRPAP09012 282 aaKnown RBP16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 NUDT2P50583 147 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 KDM4CQ9H3R0 1056 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 PKD2L2Q9NZM6 624 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 CEP170BQ9Y4F5 1589 aaPredicted RBP16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 ADGRA2Q96PE1 1338 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 A0A087X0B3 334 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 GYS1P13807 737 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 DPY19L2Q6NUT2 758 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 C1orf131Q8NDD1 294 aaKnown RBP16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 ACAD10Q6JQN1 1059 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 PPIL6Q8IXY8 311 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 FEZF2Q8TBJ5 459 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 TMEM237Q96Q45 408 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 POP1Q99575 1024 aaKnown RBP16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 TMEM8AQ9HCN3 771 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 COG2Q14746 738 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 SLC25A41Q8N5S1 370 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 MTMR8Q96EF0 704 aa16.04■□□□□ 0.16
SHROOM4-201ENST00000289292 EIF3DO15371 548 aaKnown RBP eCLIP16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 VCAM1P19320 739 aa16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 KCNT1Q5JUK3 1230 aa16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 CAAP1Q9H8G2 361 aa16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 MAGEA13PA6NCF6 341 aa16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 KLHL2O95198 593 aa16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 TAL1P17542 331 aaPredicted RBP16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 TSPY1Q01534 308 aa16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 DCAF4L1Q3SXM0 396 aa16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 KCNK16Q96T55 309 aa16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 SNX9Q9Y5X1 595 aa16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 IQGAP1P46940 1657 aa16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 LAMB3Q13751 1172 aa16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 CDC42EP5Q6NZY7 148 aa16.03■□□□□ 0.16
SHROOM4-201ENST00000289292 FBXO36Q8NEA4 188 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms