RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 ZNF408Q9H9D4 720 aa10.04□□□□□ -0.8
PDCD4-201ENST00000280154 KCND1Q9NSA2 647 aa10.04□□□□□ -0.8
PDCD4-201ENST00000280154 TYW1Q9NV66 732 aaKnown RBP10.04□□□□□ -0.8
PDCD4-201ENST00000280154 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.04□□□□□ -0.8
PDCD4-201ENST00000280154 DDX41Q9UJV9 622 aaKnown RBP10.04□□□□□ -0.8
PDCD4-201ENST00000280154 WDR37Q9Y2I8 494 aa10.04□□□□□ -0.8
PDCD4-201ENST00000280154 RFC1P35251 1148 aaPredicted RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 TCF7P36402 384 aaPredicted RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 NAPAP54920 295 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 CCNA1P78396 465 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 NONOQ15233 471 aaKnown RBP eCLIP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 CLPPQ16740 277 aaPredicted RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 ARHGAP29Q52LW3 1261 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 SGO1Q5FBB7 561 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 GADL1Q6ZQY3 521 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 HDAC2Q92769 488 aaKnown RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 DNAJC7Q99615 494 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 SELENOSQ9BQE4 189 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 TRIM55Q9BYV6 548 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 NTN4Q9HB63 628 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 RAVER2Q9HCJ3 691 aaKnown RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 ANGPTL2Q9UKU9 493 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 GNEQ9Y223 722 aaKnown RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 NVLO15381 856 aaKnown RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 KPNA6O60684 536 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 PSMD10O75832 226 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 ESRRAP11474 423 aaPredicted RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 HOXC8P31273 242 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 NPTX2P47972 431 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 ALDH5A1P51649 535 aaPredicted RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 DSTNP60981 165 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 NR5A1Q13285 461 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 CEP135Q66GS9 1140 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 CCDC50Q8IVM0 306 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 ENGASEQ8NFI3 743 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 ACMSDQ8TDX5 336 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 PXYLP1Q8TE99 480 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 HNRNPLLQ8WVV9 542 aaKnown RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 FAM20AQ96MK3 541 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 LIN28AQ9H9Z2 209 aaKnown RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 TEKT2Q9UIF3 430 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 KCNJ14Q9UNX9 436 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 BAZ2BQ9UIF8 2168 aaKnown RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 PMM2O15305 246 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 P4HBP07237 508 aaKnown RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 ZNF76P36508 570 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 RPS6P62753 249 aaKnown RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 GNL2Q13823 731 aaKnown RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 BOLA3Q53S33 107 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 ZNF574Q6ZN55 896 aaPredicted RBP10.03□□□□□ -0.8
PDCD4-201ENST00000280154 GPR142Q7Z601 462 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 NEK8Q86SG6 692 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 LRRC49Q8IUZ0 686 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 SYCE1Q8N0S2 351 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 EHBP1Q8NDI1 1231 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 TMEM174Q8WUU8 243 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 INPP5DQ92835 1189 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 RIT2Q99578 217 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 SIKE1Q9BRV8 207 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 C8orf4Q9NR00 106 aa10.03□□□□□ -0.8
PDCD4-201ENST00000280154 PPP1R3GB7ZBB8 358 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 CTAGE8P0CG41 777 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 CLCN6P51797 869 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 YBEYP58557 167 aaPredicted RBP10.02□□□□□ -0.8
PDCD4-201ENST00000280154 LACTBP83111 547 aaPredicted RBP10.02□□□□□ -0.8
PDCD4-201ENST00000280154 LAPTM5Q13571 262 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 LRSAM1Q6UWE0 723 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 HEATR3Q7Z4Q2 680 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.02□□□□□ -0.8
PDCD4-201ENST00000280154 CTAGE4Q8IX94 777 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 FERMT2Q96AC1 680 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 AK8Q96MA6 479 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 RPRD1AQ96P16 312 aaPredicted RBP10.02□□□□□ -0.8
PDCD4-201ENST00000280154 MXRA8Q9BRK3 442 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 PORCNQ9H237 461 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 C12orf4Q9NQ89 552 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 GALNT8Q9NY28 637 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 EMC3Q9P0I2 261 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 TUBGCP4Q9UGJ1 667 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 ABT1Q9ULW3 272 aaKnown RBP10.02□□□□□ -0.8
PDCD4-201ENST00000280154 TMEM5Q9Y2B1 443 aa10.02□□□□□ -0.8
PDCD4-201ENST00000280154 PI4K2BG5E9Z4 385 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 APOEP02649 317 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 G0S2P27469 103 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 MLH1P40692 756 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 CSNK2BP67870 215 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 LIPEQ05469 1076 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 IKBKEQ14164 716 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 ITPRIPL1Q6GPH6 555 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 TAPT1Q6NXT6 567 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 TOGARAM2Q6ZUX3 1019 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 LHFPL2Q6ZUX7 228 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 TBC1D1Q86TI0 1168 aaPredicted RBP10.02□□□□□ -0.81
PDCD4-201ENST00000280154 LRRTM3Q86VH5 581 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 ZDHHC17Q8IUH5 632 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 CATSPER2Q96P56 530 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 SERINC2Q96SA4 455 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 PPP1R16BQ96T49 567 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 LMBRD1Q9NUN5 540 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 SNTG2Q9NY99 539 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms