RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 CDKN1CP49918 316 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 PLCB3Q01970 1234 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 CYP4A11Q02928 519 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 WSCD2Q2TBF2 565 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 HECTD3Q5T447 861 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 PDE12Q6L8Q7 609 aaKnown RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 TRIM65Q6PJ69 517 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 TRIM72Q6ZMU5 477 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 KIAA1143Q96AT1 154 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 RHBGQ9H310 441 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 SLITRK6Q9H5Y7 841 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 PIDD1Q9HB75 910 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 SRRM3A6NNA2 597 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 SMAD9O15198 467 aaKnown RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 SMPD2O60906 423 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 GABBR2O75899 941 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 ESRRBO95718 433 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 IFNB1P01574 187 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 BTF3P20290 206 aaKnown RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 SMARCB1Q12824 385 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 PPIL2Q13356 520 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 ZNF658Q5TYW1 1059 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 ALKBH5Q6P6C2 394 aaKnown RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 CROCCP3Q8IVE0 287 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 C8orf58Q8NAV2 365 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 NSUN6Q8TEA1 469 aaKnown RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 SENP6Q9GZR1 1112 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 LMBRD1Q9NUN5 540 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 MYO3BQ8WXR4 1341 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 TMEM114B3SHH9 223 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 ZBED1O96006 694 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 NEK4P51957 841 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 NFKB2Q00653 900 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 MMEL1Q495T6 779 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 TTMPQ5BVD1 217 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 TMEM63BQ5T3F8 832 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 CPT1BQ92523 772 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 IL1RAPL2Q9NP60 686 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 PPANQ9NQ55 473 aaKnown RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 KCNQ5Q9NR82 932 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 ZSCAN5CA6NGD5 496 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 EIF3HO15372 352 aaKnown RBP eCLIP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 EDN3P14138 238 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 ACADVLP49748 655 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 POLR2GP62487 172 aaKnown RBP eCLIP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 RHOUQ7L0Q8 258 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 DIS3L2Q8IYB7 885 aaKnown RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 RNASE11Q8TAA1 199 aaKnown RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 GIPC3Q8TF64 312 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 SLC16A10Q8TF71 515 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 INTS12Q96CB8 462 aaKnown RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 ZSCAN5AQ9BUG6 496 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 NUP58Q9BVL2 599 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 FUT8Q9BYC5 575 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 UPF3BQ9BZI7 483 aaKnown RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 MRM3Q9HC36 420 aaKnown RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 RYDENQ9NUL5 291 aaKnown RBP9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 WWOXQ9NZC7 414 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 SPASTQ9UBP0 616 aa9.33□□□□□ -0.92
CTDSPL-201ENST00000273179 TRPC5OSA6NMA1 111 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 FBP2O00757 339 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 SLC7A4O43246 635 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 PSMA5P28066 241 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 ATP1A2P50993 1020 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 ARFIP2P53365 341 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 RAD23BP54727 409 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 CAPRIN1Q14444 709 aaKnown RBP9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 LPIN1Q14693 890 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 NONOQ15233 471 aaKnown RBP eCLIP9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 TLDC1Q6P9B6 456 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 TRIM69Q86WT6 500 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 SLFN12Q8IYM2 578 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 AIFM3Q96NN9 605 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 DPH5Q9H2P9 285 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 KAT14Q9H8E8 782 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 SH2B1Q9NRF2 756 aaPredicted RBP9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 FAM105AQ9NUU6 356 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 PIGNO95427 931 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 IFNA16P05015 189 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 XRCC5P13010 732 aaKnown RBP9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 ADCK5Q3MIX3 580 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 PABPC1LQ4VXU2 614 aaKnown RBP9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 CRELD2Q6UXH1 353 aaPredicted RBP9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 CEP97Q8IW35 865 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 IGSF22Q8N9C0 903 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 LZTFL1Q9NQ48 299 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 PCDHB3Q9Y5E6 796 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 FLT4P35916 1363 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 CPSF1Q10570 1443 aaKnown RBP9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 ATP7BP35670 1465 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 MAGEA13PA6NCF6 341 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 CFAP73A6NFT4 308 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 BTBD19C9JJ37 291 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 BUB1O43683 1085 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 ASMTLO95671 621 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 ATP5F1P24539 256 aaPredicted RBP9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 MLLT3P42568 568 aaPredicted RBP9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 NAA20P61599 178 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 EEF1A1P68104 462 aaKnown RBP9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 EEF1A2Q05639 463 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms