RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 CLIC2O15247 247 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 NNTQ13423 1086 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 POLD3Q15054 466 aaPredicted RBP13.84□□□□□ -0.19
PRDM16-201ENST00000270722 ADCK5Q3MIX3 580 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 RAPGEF5Q92565 580 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 ZFRQ96KR1 1074 aaKnown RBP13.84□□□□□ -0.19
PRDM16-201ENST00000270722 TBK1Q9UHD2 729 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 RABL2BQ9UNT1 228 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 SLC25A27O95847 323 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 LRG1P02750 347 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 GNA15P30679 374 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 ALDH7A1P49419 539 aaKnown RBP13.84□□□□□ -0.19
PRDM16-201ENST00000270722 PDAP1Q13442 181 aaKnown RBP13.84□□□□□ -0.19
PRDM16-201ENST00000270722 TRIP4Q15650 581 aaPredicted RBP13.84□□□□□ -0.19
PRDM16-201ENST00000270722 TCAIMQ8N3R3 496 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 MLNP12872 115 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 CNTN1Q12860 1018 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 SETD3Q86TU7 594 aaPredicted RBP13.84□□□□□ -0.19
PRDM16-201ENST00000270722 DNAJC9Q8WXX5 260 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 GLT1D1Q96MS3 346 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 SAYSD1Q9NPB0 183 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 FHOD1Q9Y613 1164 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 KDM6AO15550 1401 aaPredicted RBP13.84□□□□□ -0.19
PRDM16-201ENST00000270722 ADGRL3Q9HAR2 1447 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 NFIAQ12857 509 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 PTK6Q13882 451 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 RBBP8Q99708 897 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 ADA2Q9NZK5 511 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 ZFP69BQ9UJL9 534 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 FAM50BQ9Y247 325 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 GARTP22102 1010 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 PKP3Q9Y446 797 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 ABCC4O15439 1325 aa13.84□□□□□ -0.19
PRDM16-201ENST00000270722 DCDC2CA8MYV0 355 aa13.83□□□□□ -0.19
PRDM16-201ENST00000270722 BTN3A3O00478 584 aa13.83□□□□□ -0.19
PRDM16-201ENST00000270722 USP11P51784 963 aa13.83□□□□□ -0.19
PRDM16-201ENST00000270722 SEPT12Q8IYM1 358 aa13.83□□□□□ -0.19
PRDM16-201ENST00000270722 ZNF557Q8N988 423 aaPredicted RBP13.83□□□□□ -0.19
PRDM16-201ENST00000270722 KIF12Q96FN5 646 aa13.83□□□□□ -0.19
PRDM16-201ENST00000270722 TMEM132DQ14C87 1099 aa13.83□□□□□ -0.19
PRDM16-201ENST00000270722 WDR19Q8NEZ3 1342 aa13.83□□□□□ -0.19
PRDM16-201ENST00000270722 NR3C1P04150 777 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 SNRPFP62306 86 aaKnown RBP13.83□□□□□ -0.2
PRDM16-201ENST00000270722 FAM102AQ5T9C2 384 aaPredicted RBP13.83□□□□□ -0.2
PRDM16-201ENST00000270722 ZMYM2Q9UBW7 1377 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 MICAL3Q7RTP6 2002 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 GMNCA6NCL1 334 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 FGGP02679 453 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 HPGDP15428 266 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 NDUFA8P51970 172 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 MUC3BQ9H195 1237 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 PTPRKQ15262 1439 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 SYNCRIPO60506 623 aaKnown RBP13.83□□□□□ -0.2
PRDM16-201ENST00000270722 SGSM1Q2NKQ1 1148 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 FAAH2Q6GMR7 532 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 RGS9BPQ6ZS82 235 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 FAM47EQ6ZV65 393 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 LINC00523Q86TU6 105 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 ARRDC4Q8NCT1 418 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 MRPL39Q9NYK5 338 aaKnown RBP13.83□□□□□ -0.2
PRDM16-201ENST00000270722 TRMT6Q9UJA5 497 aaKnown RBP13.83□□□□□ -0.2
PRDM16-201ENST00000270722 SUPT3HB4E1H0 165 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 GEMIN4P57678 1058 aaKnown RBP13.83□□□□□ -0.2
PRDM16-201ENST00000270722 ACTN3Q08043 901 aaPredicted RBP13.83□□□□□ -0.2
PRDM16-201ENST00000270722 MMRN1Q13201 1228 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 PVALEFA0A1B0GWK0 134 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 MEFVO15553 781 aaPredicted RBP13.83□□□□□ -0.2
PRDM16-201ENST00000270722 TDRD7Q8NHU6 1098 aaKnown RBP13.83□□□□□ -0.2
PRDM16-201ENST00000270722 S100PBPQ96BU1 408 aa13.83□□□□□ -0.2
PRDM16-201ENST00000270722 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.83□□□□□ -0.2
PRDM16-201ENST00000270722 UTYO14607 1347 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 DGAT1O75907 488 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 FAM45BPQ6NSW5 357 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 OR6J1Q8NGC5 347 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 USP44Q9H0E7 712 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 WWP1Q9H0M0 922 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 UBA2Q9UBT2 640 aaPredicted RBP13.82□□□□□ -0.2
PRDM16-201ENST00000270722 AFF4Q9UHB7 1163 aaKnown RBP13.82□□□□□ -0.2
PRDM16-201ENST00000270722 ADAM30Q9UKF2 790 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 KIAA0556O60303 1618 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 EFCAB6Q5THR3 1501 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 SYNDIG1LA6NDD5 238 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 DGKKQ5KSL6 1271 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 SPDYAQ5MJ70 313 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 GPR141Q7Z602 305 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 OSBPL6Q9BZF3 934 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 RBAKQ9NYW8 714 aaPredicted RBP13.82□□□□□ -0.2
PRDM16-201ENST00000270722 V9GYQ6 96 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 PALLDQ8WX93 1383 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 CLCN6P51797 869 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 KRT24Q2M2I5 525 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 SV2CQ496J9 727 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 KCTD16Q68DU8 428 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 SLC7A14Q8TBB6 771 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 CMTM5Q96DZ9 223 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 FAM213AQ9BRX8 229 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 C1QTNF7Q9BXJ2 289 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 PNMA8CA0A1B0GUJ8 204 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 RHOBTB3O94955 611 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 SEMA3DO95025 777 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms