RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 KLRC2P26717 231 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 PIK3CAP42336 1068 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 MXI1P50539 228 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 SKIV2LQ15477 1246 aaKnown RBP13.71□□□□□ -0.21
SS18-202ENST00000269138 KRT39Q6A163 491 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 SPOPLQ6IQ16 392 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 LLGL2Q6P1M3 1020 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 ANKS3Q6ZW76 656 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 PALB2Q86YC2 1186 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 GPR65Q8IYL9 337 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 PDCL2Q8N4E4 241 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 SLC22A17Q8WUG5 538 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 PPP2R3CQ969Q6 453 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 EMILIN2Q9BXX0 1053 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 PRDM6Q9NQX0 595 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 FNIP2Q9P278 1114 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 FBXL5Q9UKA1 691 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 L1RE1Q9UN81 338 aa13.71□□□□□ -0.21
SS18-202ENST00000269138 STX10O60499 249 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 OAZ2O95190 189 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 GLP2RO95838 553 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 CYP11A1P05108 521 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 EPCAMP16422 314 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 ATICP31939 592 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 OR1D2P34982 312 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 YWHAHQ04917 246 aaPredicted RBP13.7□□□□□ -0.22
SS18-202ENST00000269138 ADAM15Q13444 863 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 KCNC3Q14003 757 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 SOWAHAQ2M3V2 549 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 ZNF699Q32M78 642 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 WDR72Q3MJ13 1102 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 CTXN3Q4LDR2 81 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 OVOS1Q6IE37 1185 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 EP400NLQ6ZTU2 488 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 LIMS2Q7Z4I7 341 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 OSTM1Q86WC4 334 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 EFHBQ8N7U6 833 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 RTP3Q9BQQ7 232 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 APOBEC3GQ9HC16 384 aaKnown RBP13.7□□□□□ -0.22
SS18-202ENST00000269138 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.7□□□□□ -0.22
SS18-202ENST00000269138 FANCLQ9NW38 375 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 NXF1Q9UBU9 619 aaKnown RBP13.7□□□□□ -0.22
SS18-202ENST00000269138 BACE2Q9Y5Z0 518 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 CDY1Q9Y6F8 540 aa13.7□□□□□ -0.22
SS18-202ENST00000269138 H7C4K7 107 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 HCRTO43612 131 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 HUS1O60921 280 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 CLSTN1O94985 981 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 STAU1O95793 577 aaKnown RBP13.69□□□□□ -0.22
SS18-202ENST00000269138 ASS1P00966 412 aaKnown RBP13.69□□□□□ -0.22
SS18-202ENST00000269138 SPATA31D3P0C874 917 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 LTBRP36941 435 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 MTIF2P46199 727 aaKnown RBP13.69□□□□□ -0.22
SS18-202ENST00000269138 FMO5P49326 533 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 NDUFV1P49821 464 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 CLCN4P51793 760 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 ARPP19P56211 112 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 DLX2Q07687 328 aaPredicted RBP13.69□□□□□ -0.22
SS18-202ENST00000269138 KCNH2Q12809 1159 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 COL19A1Q14993 1142 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 NCAPHQ15003 741 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 CTC1Q2NKJ3 1217 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 SGSM1Q2NKQ1 1148 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 PDXDC1Q6P996 788 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 SPATA31D4Q6ZUB0 917 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 AOPEPQ8N6M6 819 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 TMEM209Q96SK2 561 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 MMS19Q96T76 1030 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 CDCA3Q99618 268 aaPredicted RBP13.69□□□□□ -0.22
SS18-202ENST00000269138 VRTNQ9H8Y1 702 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 CLDND1Q9NY35 253 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.69□□□□□ -0.22
SS18-202ENST00000269138 HCFC2Q9Y5Z7 792 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 REV3LO60673 3130 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 KCNJ18B7U540 433 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 ADH1AP07327 375 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 OR4Q2P0C623 313 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 CDR1P51861 262 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 CDH8P55286 799 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 TNNC1P63316 161 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 MYL7Q01449 175 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 MYL5Q02045 173 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 CREMQ03060 361 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 KCNJ12Q14500 433 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 ZNF667Q5HYK9 610 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 CDKAL1Q5VV42 579 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 ZNF280DQ6N043 979 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 LILRA6Q6PI73 481 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 SCARA5Q6ZMJ2 495 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 METTL23Q86XA0 190 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 ADGRF2Q8IZF7 708 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 TOP6BLQ8N6T0 577 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 FBXL13Q8NEE6 735 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 OR10T2Q8NGX3 314 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 KBTBD7Q8WVZ9 684 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 MRPL45Q9BRJ2 306 aaKnown RBP13.69□□□□□ -0.22
SS18-202ENST00000269138 SDCBP2Q9H190 292 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 HSD3B7Q9H2F3 369 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 SMYD3Q9H7B4 428 aa13.69□□□□□ -0.22
SS18-202ENST00000269138 RAB20Q9NX57 234 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms