RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CILPO75339 1184 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 FTCDO95954 541 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 RAP1GAPP47736 663 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 RAD23BP54727 409 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 MYO1EQ12965 1108 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 GLRA4Q5JXX5 417 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 TRAF7Q6Q0C0 670 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 MCOLN2Q8IZK6 566 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 TSC1Q92574 1164 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 OSBPL9Q96SU4 736 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 SEZ6LQ9BYH1 1024 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 UNC93B1Q9H1C4 597 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 AVENQ9NQS1 362 aaPredicted RBP17.45■□□□□ 0.38
TPM1-201ENST00000267996 PAK6Q9NQU5 681 aaPredicted RBP17.45■□□□□ 0.38
TPM1-201ENST00000267996 STARD7Q9NQZ5 370 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 DNAH12Q6ZR08 3092 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 ARVCFO00192 962 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 PPEF2O14830 753 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 TLR3O15455 904 aaKnown RBP17.45■□□□□ 0.38
TPM1-201ENST00000267996 ZNF623O75123 536 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 LSM8O95777 96 aaKnown RBP17.45■□□□□ 0.38
TPM1-201ENST00000267996 MYBL1P10243 752 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 GHRP10912 638 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 CD52P31358 61 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 CDH5P33151 784 aaPredicted RBP17.45■□□□□ 0.38
TPM1-201ENST00000267996 ZNF618Q5T7W0 954 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 NAA35Q5VZE5 725 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 RSRC2Q7L4I2 434 aaKnown RBP17.45■□□□□ 0.38
TPM1-201ENST00000267996 PHF13Q86YI8 300 aaPredicted RBP17.45■□□□□ 0.38
TPM1-201ENST00000267996 HACE1Q8IYU2 909 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 TFAP2BQ92481 460 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 ZNF653Q96CK0 615 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 TRIM11Q96F44 468 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 VCPIP1Q96JH7 1222 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 BEGAINQ9BUH8 593 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 TRPV6Q9H1D0 765 aa17.45■□□□□ 0.38
TPM1-201ENST00000267996 KBTBD13C9JR72 458 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 PTGESO14684 152 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 CKBP12277 381 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 BRD2P25440 801 aaKnown RBP17.44■□□□□ 0.38
TPM1-201ENST00000267996 CDK7P50613 346 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 TNNC1P63316 161 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 PAK2Q13177 524 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 NAA30Q147X3 362 aaPredicted RBP17.44■□□□□ 0.38
TPM1-201ENST00000267996 ZNF394Q53GI3 561 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 MON1BQ7L1V2 547 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 NT5DC3Q86UY8 548 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 CREG2Q8IUH2 290 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 SLC4A11Q8NBS3 891 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 CPA5Q8WXQ8 436 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 PPP1R10Q96QC0 940 aaKnown RBP17.44■□□□□ 0.38
TPM1-201ENST00000267996 ELOVL4Q9GZR5 314 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 PDCL3Q9H2J4 239 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 CTTNBP2NLQ9P2B4 639 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 UVRAGQ9P2Y5 699 aa17.44■□□□□ 0.38
TPM1-201ENST00000267996 PUF60Q9UHX1 559 aaKnown RBP17.44■□□□□ 0.38
TPM1-201ENST00000267996 BARX2Q9UMQ3 279 aaPredicted RBP17.44■□□□□ 0.38
TPM1-201ENST00000267996 DNM1LO00429 736 aa17.43■□□□□ 0.38
TPM1-201ENST00000267996 MGEA5O60502 916 aa17.43■□□□□ 0.38
TPM1-201ENST00000267996 ITGA4P13612 1032 aa17.43■□□□□ 0.38
TPM1-201ENST00000267996 ZSCAN20P17040 1043 aaPredicted RBP17.43■□□□□ 0.38
TPM1-201ENST00000267996 LRPAP1P30533 357 aa17.43■□□□□ 0.38
TPM1-201ENST00000267996 NSFP46459 744 aaKnown RBP17.43■□□□□ 0.38
TPM1-201ENST00000267996 SOX4Q06945 474 aaPredicted RBP17.43■□□□□ 0.38
TPM1-201ENST00000267996 PTP4A2Q12974 167 aa17.43■□□□□ 0.38
TPM1-201ENST00000267996 C11orf63Q6NUN7 778 aa17.43■□□□□ 0.38
TPM1-201ENST00000267996 ZNF572Q7Z3I7 529 aaPredicted RBP17.43■□□□□ 0.38
TPM1-201ENST00000267996 COG1Q8WTW3 980 aa17.43■□□□□ 0.38
TPM1-201ENST00000267996 UBE2Q2Q8WVN8 375 aa17.43■□□□□ 0.38
TPM1-201ENST00000267996 TWNKQ96RR1 684 aa17.43■□□□□ 0.38
TPM1-201ENST00000267996 ZNF518BQ9C0D4 1074 aa17.43■□□□□ 0.38
TPM1-201ENST00000267996 GOLPH3Q9H4A6 298 aa17.43■□□□□ 0.38
TPM1-201ENST00000267996 RNF19AQ9NV58 838 aa17.43■□□□□ 0.38
TPM1-201ENST00000267996 WBP1LQ9NX94 342 aa17.43■□□□□ 0.38
TPM1-201ENST00000267996 CNOT8Q9UFF9 292 aaKnown RBP17.43■□□□□ 0.38
TPM1-201ENST00000267996 GIT1Q9Y2X7 761 aa17.43■□□□□ 0.38
TPM1-201ENST00000267996 FAM170AA1A519 330 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 CES2O00748 559 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 ZNF185O15231 689 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 KIF4AO95239 1232 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 PNPLA4P41247 253 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 RAB27AP51159 221 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 C1QBPQ07021 282 aaKnown RBP17.42■□□□□ 0.38
TPM1-201ENST00000267996 CKAP4Q07065 602 aaKnown RBP17.42■□□□□ 0.38
TPM1-201ENST00000267996 RPS6KA1Q15418 735 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 DAAM2Q86T65 1068 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 PASD1Q8IV76 773 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 GSTCDQ8NEC7 633 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 TMEM176AQ96HP8 235 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 LHX5Q9H2C1 402 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 HMGXB4Q9UGU5 601 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.42■□□□□ 0.38
TPM1-201ENST00000267996 MEIS3P2A8K0S8 358 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 PDE2AO00408 941 aaPredicted RBP17.42■□□□□ 0.38
TPM1-201ENST00000267996 ATMINO43313 823 aaPredicted RBP17.42■□□□□ 0.38
TPM1-201ENST00000267996 MED7O43513 233 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 ATF7P17544 494 aaPredicted RBP17.42■□□□□ 0.38
TPM1-201ENST00000267996 MMP8P22894 467 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 TUBB4BP68371 445 aa17.42■□□□□ 0.38
TPM1-201ENST00000267996 ERCC6LQ2NKX8 1250 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms