RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 STK10O94804 968 aaKnown RBP12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 KRT19P08727 400 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 HNRNPH3P31942 346 aaKnown RBP12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 ALDH5A1P51649 535 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 TPD52P55327 224 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 NPEPPSP55786 919 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 PDE1BQ01064 536 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 KRT81Q14533 505 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 KLHL38Q2WGJ6 581 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 VSIG10LQ86VR7 867 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 PIP4K2CQ8TBX8 421 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 PGM2Q96G03 612 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 MMTAG2Q9BU76 263 aaKnown RBP12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 HAO1Q9UJM8 370 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 AFG3L2Q9Y4W6 797 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 SCINQ9Y6U3 715 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 KIAA1551Q9HCM1 1747 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 MCF2LO15068 1137 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 KRT37O76014 449 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 SERPINB4P48594 390 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 GIT2Q14161 759 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 PPP2R5DQ14738 602 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 PDCD2Q16342 344 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 RXFP1Q9HBX9 757 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 ALG13Q9NP73 1137 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 PAPOLBQ9NRJ5 636 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 OLFML3Q9NRN5 406 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 SLC16A4O15374 487 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 LDHAP00338 332 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 MAPTP10636 758 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 ITGA8P53708 1063 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 JAG1P78504 1218 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 ERMARDQ5T6L9 678 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 PPP1R2P3Q6NXS1 205 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 SCYL2Q6P3W7 929 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 CRELD2Q6UXH1 353 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 SLC30A10Q6XR72 485 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 APTXQ7Z2E3 356 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 WDR75Q8IWA0 830 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 MTRQ99707 1265 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 C11orf70Q9BRQ4 267 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 SMYD3Q9H7B4 428 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 MCM8Q9UJA3 840 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 PPME1Q9Y570 386 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 ASTN2O75129 1339 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 SPDYE16A6NNV3 312 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 CYP26A1O43174 497 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 GNAT1P11488 350 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 FECHP22830 423 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 VHLP40337 213 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 TRADDQ15628 312 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 SLC13A5Q86YT5 568 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 RHOT1Q8IXI2 618 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 AGAP11Q8TF27 550 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 CALN1Q9BXU9 219 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 ASCC2Q9H1I8 757 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 UVRAGQ9P2Y5 699 aa12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 CHORDC1Q9UHD1 332 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-201ENST00000266546 A0A0A6YYK5 440 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 RFC5P40937 340 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 EPHB1P54762 984 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 NXNQ6DKJ4 435 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 CYP2W1Q8TAV3 490 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 SCFD2Q8WU76 684 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 NLRP7Q8WX94 980 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 INPP4AQ96PE3 977 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 P2RX7Q99572 595 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 ABCF3Q9NUQ8 709 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 CELF2O95319 508 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 EGFRP00533 1210 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 CDC25CP30307 473 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 STAT5BP51692 787 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 ZC2HC1CQ53FD0 456 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 ATP11CQ8NB49 1132 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 CEP70Q8NHQ1 597 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 CDKL2Q92772 493 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 ZSWIM1Q9BR11 485 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 CDC42EP4Q9H3Q1 356 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 SUDS3Q9H7L9 328 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 MYH8P13535 1937 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 GOLGA8RI6L899 631 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 ZNF263O14978 683 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 LPXNO60711 386 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 SLITRK3O94933 977 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 SNUPNO95149 360 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 COL11A2P13942 1736 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 FNTAP49354 379 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 PAPOLAP51003 745 aaKnown RBP12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 MYBPC2Q14324 1141 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 SURF1Q15526 300 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 ANKRD20A2Q5SQ80 823 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 ANKRD20A1Q5TYW2 823 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 HAUS6Q7Z4H7 955 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 C2orf40Q9H1Z8 148 aa12.15□□□□□ -0.46
CLSTN3-201ENST00000266546 K7ERI5 159 aa12.15□□□□□ -0.47
CLSTN3-201ENST00000266546 GAS2O43903 313 aaKnown RBP12.15□□□□□ -0.47
CLSTN3-201ENST00000266546 CSPG5O95196 566 aa12.15□□□□□ -0.47
CLSTN3-201ENST00000266546 NCF2P19878 526 aaPredicted RBP12.15□□□□□ -0.47
CLSTN3-201ENST00000266546 DRD4P21917 467 aa12.15□□□□□ -0.47
CLSTN3-201ENST00000266546 YWHAEP62258 255 aaKnown RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms