RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 FOXR2Q6PJQ5 311 aa15.31■□□□□ 0.04
PDLIM2-201ENST00000265810 DEFB128Q7Z7B8 93 aa15.31■□□□□ 0.04
PDLIM2-201ENST00000265810 C1orf54Q8WWF1 131 aa15.31■□□□□ 0.04
PDLIM2-201ENST00000265810 MAGED2Q9UNF1 606 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-201ENST00000265810 TOMM70O94826 608 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 ITIH3Q06033 890 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 RNF187Q5TA31 235 aaPredicted RBP15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 PHLDB3Q6NSJ2 640 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 CROCCP2Q86T23 111 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 BTBD6Q96KE9 485 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 ITGA11Q9UKX5 1188 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 RGS16O15492 202 aaPredicted RBP15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 AOC2O75106 756 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 ATICP31939 592 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 BTBD8Q5XKL5 378 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 TPCN2Q8NHX9 752 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 DNAJC17Q9NVM6 304 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 MROH7Q68CQ1 1323 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 GZMAP12544 262 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 PRKCZQ05513 592 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 PLCD3Q8N3E9 789 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 CELF4Q9BZC1 486 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 OSGEPQ9NPF4 335 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 HAUS2Q9NVX0 235 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 ARHGAP28Q9P2N2 729 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 UBR3Q6ZT12 1888 aa15.3■□□□□ 0.04
PDLIM2-201ENST00000265810 COL5A3P25940 1745 aaPredicted RBP15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 GRID2IPA4D2P6 1211 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 MAPK13O15264 365 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 ARF4P18085 180 aaPredicted RBP15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 DAW1Q8N136 415 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 ZNF710Q8N1W2 664 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 OR5B17Q8NGF7 314 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 FEZF2Q8TBJ5 459 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 SGIP1Q9BQI5 828 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 SIK2Q9H0K1 926 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 ACP6Q9NPH0 428 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 CABYRO75952 493 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 MOCS2O96007 188 aaPredicted RBP15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 VDRP11473 427 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 RRM1P23921 792 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 ARL2P36404 184 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 PTPN11Q06124 597 aaPredicted RBP15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 GLE1Q53GS7 698 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 RASAL3Q86YV0 1011 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 ZNF606Q8WXB4 792 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 SEPT8Q92599 483 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 MED15Q96RN5 788 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 FRMD3A2A2Y4 597 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 DUSP11O75319 330 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 CACNB2Q08289 660 aaPredicted RBP15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 ARHGEF18Q6ZSZ5 1173 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 NPLOC4Q8TAT6 608 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 P3H4Q92791 437 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 TMEM176AQ96HP8 235 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 GAD1Q99259 594 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 FMO2Q99518 471 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 ADAM2Q99965 735 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 SLITRK6Q9H5Y7 841 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 AMACRQ9UHK6 382 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 TIMM13Q9Y5L4 95 aaPredicted RBP15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 BCORQ6W2J9 1755 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 PODXLO00592 558 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 TREHO43280 583 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 SART1O43290 800 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 YWHAGP61981 247 aaKnown RBP eCLIP15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 MEA1Q16626 185 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 ZCWPW2Q504Y3 356 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 LRRC15Q8TF66 581 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 SENP6Q9GZR1 1112 aaPredicted RBP15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 CYP3A43Q9HB55 503 aa15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 CPSF3Q9UKF6 684 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-201ENST00000265810 NFICP08651 508 aa15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 CPLX4Q7Z7G2 160 aa15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 ADGRF2Q8IZF7 708 aa15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 TTC13Q8NBP0 860 aa15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 DDX56Q9NY93 547 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 RNF225M0QZC1 329 aaPredicted RBP15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 DDX3XO00571 662 aaKnown RBP eCLIP15.28■□□□□ 0.049e-11■■■■■ 33.8
PDLIM2-201ENST00000265810 HMGCRP04035 888 aa15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 BCAR1P56945 870 aa15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 MRPS6P82932 125 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 PIGHQ14442 188 aaPredicted RBP15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 COG1Q8WTW3 980 aa15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 METTL5Q9NRN9 209 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 BRWD3Q6RI45 1802 aa15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 A0A0B4J269 797 aa15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 TYW5A2RUC4 315 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 TDRD10Q5VZ19 366 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 CCDC137Q6PK04 289 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 EPM2AIP1Q7L775 607 aaPredicted RBP15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 C12orf56Q8IXR9 622 aa15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 SREK1Q8WXA9 508 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-201ENST00000265810 TADA3O75528 432 aa15.27■□□□□ 0.04
PDLIM2-201ENST00000265810 FAM200BP0CF97 657 aa15.27■□□□□ 0.04
PDLIM2-201ENST00000265810 ODC1P11926 461 aa15.27■□□□□ 0.04
PDLIM2-201ENST00000265810 PHBP35232 272 aa15.27■□□□□ 0.04
PDLIM2-201ENST00000265810 ARHGAP1Q07960 439 aa15.27■□□□□ 0.04
PDLIM2-201ENST00000265810 GSPT2Q8IYD1 628 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms