RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 ADALQ6DHV7 355 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 DSTYKQ6XUX3 929 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 RNF19BQ6ZMZ0 732 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 CCDC73Q6ZRK6 1079 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 SV2BQ7L1I2 683 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 USP37Q86T82 979 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 SFR1Q86XK3 245 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 DNAJC19Q96DA6 116 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 TCEAL4Q96EI5 215 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 SHDQ96IW2 340 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 USP28Q96RU2 1077 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 KXD1Q9BQD3 176 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 PANK2Q9BZ23 570 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 IKZF4Q9H2S9 585 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 ZSCAN16Q9H4T2 348 aaPredicted RBP10.55□□□□□ -0.72
VPS41-201ENST00000265745 ASB7Q9H672 318 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 DLGAP2Q9P1A6 1054 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 CEP72Q9P209 647 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 SEL1LQ9UBV2 794 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 DERAQ9Y315 318 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 SIT1Q9Y3P8 196 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 C2CD2Q9Y426 696 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 OR6C75A6NL08 312 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 NRG2O14511 850 aaPredicted RBP10.54□□□□□ -0.72
VPS41-201ENST00000265745 STX6O43752 255 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 GFRA3O60609 400 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 VNN2O95498 520 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 DCNP07585 359 aaKnown RBP10.54□□□□□ -0.72
VPS41-201ENST00000265745 CPB1P15086 417 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 CEBPBP17676 345 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 GAP43P17677 238 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 RFX1P22670 979 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 TXLNAP40222 546 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 CCR2P41597 374 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 NASPP49321 788 aaPredicted RBP10.54□□□□□ -0.72
VPS41-201ENST00000265745 EPHA5P54756 1037 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 KCNA1Q09470 495 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 TMEM132DQ14C87 1099 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 POSTNQ15063 836 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 ANGPT1Q15389 498 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 CYP4A22Q5TCH4 519 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 TANGO2Q6ICL3 276 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 IQCEQ6IPM2 695 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 CRELD2Q6UXH1 353 aaPredicted RBP10.54□□□□□ -0.72
VPS41-201ENST00000265745 HVCN1Q96D96 273 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 SENP8Q96LD8 212 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 ZNF512Q96ME7 567 aaPredicted RBP10.54□□□□□ -0.72
VPS41-201ENST00000265745 ZSWIM3Q96MP5 696 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 DDX23Q9BUQ8 820 aaKnown RBP10.54□□□□□ -0.72
VPS41-201ENST00000265745 PLA2G2FQ9BZM2 168 aa10.54□□□□□ -0.72
VPS41-201ENST00000265745 MRPL44Q9H9J2 332 aaKnown RBP10.54□□□□□ -0.72
VPS41-201ENST00000265745 AGO2Q9UKV8 859 aaKnown RBP10.54□□□□□ -0.72
VPS41-201ENST00000265745 A0A087X0B3 334 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 KANSL1LA0AUZ9 987 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 FRMD3A2A2Y4 597 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 MOSPD3O75425 235 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 OR4Q2P0C623 313 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 STAT6P42226 847 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 PFKPQ01813 784 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 PRKCQQ04759 706 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 DUSP4Q13115 394 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 MYBPC2Q14324 1141 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 MLF2Q15773 248 aaPredicted RBP10.53□□□□□ -0.72
VPS41-201ENST00000265745 FAM78AQ5JUQ0 283 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 OVOS1Q6IE37 1185 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 CENPPQ6IPU0 288 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 PDZD4Q76G19 769 aaPredicted RBP10.53□□□□□ -0.72
VPS41-201ENST00000265745 ASCL5Q7RTU5 278 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 ELMOD1Q8N336 334 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 ATAD1Q8NBU5 361 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 LEMD2Q8NC56 503 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 LINC00301Q8NCQ3 95 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 PJA1Q8NG27 643 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 POMGNT1Q8WZA1 660 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 ELSPBP1Q96BH3 223 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 PGLYRP2Q96PD5 576 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 ACCSQ96QU6 501 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 FOXQ1Q9C009 403 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 CRISPLD1Q9H336 500 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 ZFP14Q9HCL3 533 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 OLFML3Q9NRN5 406 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 DPP3Q9NY33 737 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 TBC1D7Q9P0N9 293 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 EXOC7Q9UPT5 735 aa10.53□□□□□ -0.72
VPS41-201ENST00000265745 RIF1Q5UIP0 2472 aaKnown RBP10.53□□□□□ -0.72
VPS41-201ENST00000265745 TDRD15B5MCY1 1934 aaKnown RBP10.52□□□□□ -0.72
VPS41-201ENST00000265745 CYP11A1P05108 521 aa10.52□□□□□ -0.73
VPS41-201ENST00000265745 ODC1P11926 461 aa10.52□□□□□ -0.73
VPS41-201ENST00000265745 IDEP14735 1019 aa10.52□□□□□ -0.73
VPS41-201ENST00000265745 GLULP15104 373 aa10.52□□□□□ -0.73
VPS41-201ENST00000265745 FCARP24071 287 aa10.52□□□□□ -0.73
VPS41-201ENST00000265745 CASP5P51878 434 aa10.52□□□□□ -0.73
VPS41-201ENST00000265745 EPHB3P54753 998 aa10.52□□□□□ -0.73
VPS41-201ENST00000265745 L1TD1Q5T7N2 865 aaKnown RBP10.52□□□□□ -0.73
VPS41-201ENST00000265745 ARMCX5Q6P1M9 558 aa10.52□□□□□ -0.73
VPS41-201ENST00000265745 FRMD5Q7Z6J6 570 aa10.52□□□□□ -0.73
VPS41-201ENST00000265745 OR10T2Q8NGX3 314 aa10.52□□□□□ -0.73
VPS41-201ENST00000265745 SMARCD2Q92925 531 aa10.52□□□□□ -0.73
VPS41-201ENST00000265745 SNX21Q969T3 373 aa10.52□□□□□ -0.73
VPS41-201ENST00000265745 BORCS6Q96GS4 357 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms