RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 FAM171A1Q5VUB5 890 aa13.64□□□□□ -0.23
SGCE-201ENST00000265735 CEP135Q66GS9 1140 aa13.64□□□□□ -0.23
SGCE-201ENST00000265735 JADE1Q6IE81 842 aa13.64□□□□□ -0.23
SGCE-201ENST00000265735 SAAL1Q96ER3 474 aa13.64□□□□□ -0.23
SGCE-201ENST00000265735 FBXL18Q96ME1 805 aa13.64□□□□□ -0.23
SGCE-201ENST00000265735 FAM213AQ9BRX8 229 aa13.64□□□□□ -0.23
SGCE-201ENST00000265735 EMILIN2Q9BXX0 1053 aa13.64□□□□□ -0.23
SGCE-201ENST00000265735 C2CD2Q9Y426 696 aa13.64□□□□□ -0.23
SGCE-201ENST00000265735 PAXBP1Q9Y5B6 917 aa13.64□□□□□ -0.23
SGCE-201ENST00000265735 GOLGA6L9A6NEM1 432 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 XPOTO43592 962 aaKnown RBP13.63□□□□□ -0.23
SGCE-201ENST00000265735 IL18RAPO95256 599 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 C1RP00736 705 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 NFICP08651 508 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 FGFR3P22607 806 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 NDUFV1P49821 464 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 WNT7BP56706 349 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 PUS10Q3MIT2 529 aaKnown RBP13.63□□□□□ -0.23
SGCE-201ENST00000265735 VWA3BQ502W6 1294 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 RTP2Q5QGT7 225 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 KIAA1841Q6NSI8 718 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 EP400NLQ6ZTU2 488 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 BRSK2Q8IWQ3 736 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 C12orf56Q8IXR9 622 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 GPD1LQ8N335 351 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 LNX1Q8TBB1 728 aaPredicted RBP13.63□□□□□ -0.23
SGCE-201ENST00000265735 TMEM174Q8WUU8 243 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 PIK3R5Q8WYR1 880 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 B3GALT6Q96L58 329 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 KCTD10Q9H3F6 313 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 PCIF1Q9H4Z3 704 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.63□□□□□ -0.23
SGCE-201ENST00000265735 AGPAT3Q9NRZ7 376 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 FNIP2Q9P278 1114 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 CGNQ9P2M7 1197 aaKnown RBP13.63□□□□□ -0.23
SGCE-201ENST00000265735 BARX2Q9UMQ3 279 aaPredicted RBP13.63□□□□□ -0.23
SGCE-201ENST00000265735 PLXNA3P51805 1871 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 A0A0C4DFX4 3053 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 TCF20Q9UGU0 1960 aaKnown RBP13.63□□□□□ -0.23
SGCE-201ENST00000265735 GRXCR2A6NFK2 248 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 C2CD2LO14523 706 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 TEX28O15482 410 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 TRAPPC3O43617 180 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 CALUO43852 315 aaPredicted RBP13.63□□□□□ -0.23
SGCE-201ENST00000265735 FECHP22830 423 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 CA8P35219 290 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 BRCC3P46736 316 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 CLCN4P51793 760 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 TSR1Q2NL82 804 aaKnown RBP13.63□□□□□ -0.23
SGCE-201ENST00000265735 MIIPQ5JXC2 388 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 NT5DC4Q86YG4 428 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 TMTC1Q8IUR5 882 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 NELFCDQ8IXH7 590 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 TMEM130Q8N3G9 435 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 SMRP1Q8NCR6 262 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 CASP10Q92851 521 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 FAM212AQ96EL1 285 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 EEF2KMTQ96G04 330 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 ERGIC2Q96RQ1 377 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 TTPALQ9BTX7 342 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 ABHD10Q9NUJ1 306 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 HSPBP1Q9NZL4 362 aa13.63□□□□□ -0.23
SGCE-201ENST00000265735 LUC7L2Q9Y383 392 aaKnown RBP13.63□□□□□ -0.23
SGCE-201ENST00000265735 MTCL1Q9Y4B5 1905 aaKnown RBP13.62□□□□□ -0.23
SGCE-201ENST00000265735 ANO9A1A5B4 782 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 GOLGA8IPA6NC78 632 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 GOLGA8JA6NMD2 632 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 ADH1AP07327 375 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 SRGAP2BP0DMP2 458 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 AARSP49588 968 aaKnown RBP eCLIP13.62□□□□□ -0.23
SGCE-201ENST00000265735 TMEM132DQ14C87 1099 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 CCDC40Q4G0X9 1142 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 ANKRD54Q6NXT1 300 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 SYCE2Q6PIF2 218 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 ZC3H3Q8IXZ2 948 aaKnown RBP13.62□□□□□ -0.23
SGCE-201ENST00000265735 EFCAB13Q8IY85 973 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 BEST2Q8NFU1 509 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 RIN2Q8WYP3 895 aaPredicted RBP13.62□□□□□ -0.23
SGCE-201ENST00000265735 SUSD3Q96L08 255 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 PCMTD1Q96MG8 357 aaPredicted RBP13.62□□□□□ -0.23
SGCE-201ENST00000265735 NDST4Q9H3R1 872 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 KIAA1586Q9HCI6 787 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 RBAKQ9NYW8 714 aaPredicted RBP13.62□□□□□ -0.23
SGCE-201ENST00000265735 CD207Q9UJ71 328 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 CAPN11Q9UMQ6 739 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 TRAF3IP3Q9Y228 551 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 PPP2R2CQ9Y2T4 447 aa13.62□□□□□ -0.23
SGCE-201ENST00000265735 VCANP13611 3396 aa13.61□□□□□ -0.23
SGCE-201ENST00000265735 PIRO00625 290 aa13.61□□□□□ -0.23
SGCE-201ENST00000265735 PDXKO00764 312 aa13.61□□□□□ -0.23
SGCE-201ENST00000265735 CETN3O15182 167 aa13.61□□□□□ -0.23
SGCE-201ENST00000265735 MBTPS2O43462 519 aa13.61□□□□□ -0.23
SGCE-201ENST00000265735 HOXB8P17481 243 aaPredicted RBP13.61□□□□□ -0.23
SGCE-201ENST00000265735 TRIM21P19474 475 aaKnown RBP13.61□□□□□ -0.23
SGCE-201ENST00000265735 KLRC2P26717 231 aa13.61□□□□□ -0.23
SGCE-201ENST00000265735 KRT9P35527 623 aa13.61□□□□□ -0.23
SGCE-201ENST00000265735 GUCY2FP51841 1108 aa13.61□□□□□ -0.23
SGCE-201ENST00000265735 CREMQ03060 361 aa13.61□□□□□ -0.23
SGCE-201ENST00000265735 SYCP1Q15431 976 aa13.61□□□□□ -0.23
SGCE-201ENST00000265735 FIGNQ5HY92 759 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms