RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 MPHOSPH6Q99547 160 aaKnown RBP11.85□□□□□ -0.51
MSH3-201ENST00000265081 IFT122Q9HBG6 1241 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.85□□□□□ -0.514e-7■■■■■ 166.1
MSH3-201ENST00000265081 ADAM22Q9P0K1 906 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 R3HDM2Q9Y2K5 976 aaKnown RBP11.85□□□□□ -0.51
MSH3-201ENST00000265081 ATP1A2P50993 1020 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 SLC29A2Q14542 456 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 SGO2Q562F6 1265 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 HIBCHQ6NVY1 386 aaPredicted RBP11.85□□□□□ -0.51
MSH3-201ENST00000265081 LLGL2Q6P1M3 1020 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 B4GALNT4Q76KP1 1039 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 GTF3C2Q8WUA4 911 aaPredicted RBP11.85□□□□□ -0.51
MSH3-201ENST00000265081 CCT8L2Q96SF2 557 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 DRG1Q9Y295 367 aaKnown RBP11.85□□□□□ -0.51
MSH3-201ENST00000265081 WEE2P0C1S8 567 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 CCT5P48643 541 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 SP4Q02446 784 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 Q3C1V9 767 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 LDLRAD1Q5T700 205 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 DENND2CQ68D51 928 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 ZNF467Q7Z7K2 595 aaPredicted RBP11.85□□□□□ -0.51
MSH3-201ENST00000265081 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.85□□□□□ -0.51
MSH3-201ENST00000265081 SIX4Q9UIU6 781 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 ABHD2P08910 425 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 IQCF3P0C7M6 154 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 ARHGAP1Q07960 439 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 AUHQ13825 339 aaKnown RBP11.84□□□□□ -0.51
MSH3-201ENST00000265081 DUOXA2Q1HG44 320 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 ZNF792Q3KQV3 632 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 RCOR2Q8IZ40 523 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 MTMR12Q9C0I1 747 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 CISHQ9NSE2 258 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 ANKFY1Q9P2R3 1169 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 HBP1O60381 514 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 MAGOHP61326 146 aaKnown RBP11.84□□□□□ -0.51
MSH3-201ENST00000265081 OGDHQ02218 1023 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 TAPT1Q6NXT6 567 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 MMS22LQ6ZRQ5 1243 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 CCDC105Q8IYK2 499 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 SERPINB12Q96P63 405 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 TRAIPQ9BWF2 469 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 SMARCAD1Q9H4L7 1026 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 NOVA2Q9UNW9 492 aaKnown RBP11.84□□□□□ -0.51
MSH3-201ENST00000265081 MYL6P60660 151 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 SLC25A11Q02978 314 aaKnown RBP11.84□□□□□ -0.51
MSH3-201ENST00000265081 R3HDM1Q15032 1099 aaKnown RBP11.84□□□□□ -0.51
MSH3-201ENST00000265081 OASLQ15646 514 aaKnown RBP11.84□□□□□ -0.51
MSH3-201ENST00000265081 MAPK6Q16659 721 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 USP50Q70EL3 339 aaPredicted RBP11.84□□□□□ -0.51
MSH3-201ENST00000265081 TRMT1LQ7Z2T5 733 aaKnown RBP11.84□□□□□ -0.51
MSH3-201ENST00000265081 IPO4Q8TEX9 1081 aaKnown RBP11.84□□□□□ -0.51
MSH3-201ENST00000265081 RSPH14Q9UHP6 348 aa11.84□□□□□ -0.51
MSH3-201ENST00000265081 GMNCA6NCL1 334 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 LIASO43766 372 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 ZNF484Q5JVG2 852 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 NCAPG2Q86XI2 1143 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 ZBTB8OSQ8IWT0 167 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 TFAP2BQ92481 460 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 RAPGEF5Q92565 580 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 C11orf70Q9BRQ4 267 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 FRMD8P1Q9BZ68 369 aaPredicted RBP11.83□□□□□ -0.52
MSH3-201ENST00000265081 AZI2Q9H6S1 392 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 FAM169AQ9Y6X4 670 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 EBAG9O00559 213 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 RALAP11233 206 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 DRD4P21917 467 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 KCNJ1P48048 391 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 KCTD19Q17RG1 926 aaPredicted RBP11.83□□□□□ -0.52
MSH3-201ENST00000265081 DLK2Q6UY11 383 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 NKD2Q969F2 451 aaPredicted RBP11.83□□□□□ -0.52
MSH3-201ENST00000265081 DCPSQ96C86 337 aaKnown RBP11.83□□□□□ -0.52
MSH3-201ENST00000265081 CDCA5Q96FF9 252 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 RBM41Q96IZ5 413 aaKnown RBP11.83□□□□□ -0.52
MSH3-201ENST00000265081 CLMNQ96JQ2 1002 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 TRIM31Q9BZY9 425 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 CDC42EP4Q9H3Q1 356 aaKnown RBP11.83□□□□□ -0.52
MSH3-201ENST00000265081 THAP12O43422 761 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 FSBPO95073 299 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 CHKAP35790 457 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 GJA5P36382 358 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 TFDP1Q14186 410 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 KRT71Q3SY84 523 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 ATF7IP2Q5U623 682 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 FASTKD5Q7L8L6 764 aaKnown RBP11.83□□□□□ -0.52
MSH3-201ENST00000265081 BBOF1Q8ND07 529 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 C1orf54Q8WWF1 131 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 MMP19Q99542 508 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 OSBPL8Q9BZF1 889 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 CDT1Q9H211 546 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 ELP3Q9H9T3 547 aa11.83□□□□□ -0.52
MSH3-201ENST00000265081 EVPLQ92817 2033 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 A0A087WUV0 522 aaPredicted RBP11.82□□□□□ -0.52
MSH3-201ENST00000265081 TLR3O15455 904 aaKnown RBP11.82□□□□□ -0.52
MSH3-201ENST00000265081 DDNO94850 711 aaPredicted RBP11.82□□□□□ -0.52
MSH3-201ENST00000265081 MCF2P10911 925 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 ATICP31939 592 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 INCA1Q0VD86 236 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 PIGHQ14442 188 aaPredicted RBP11.82□□□□□ -0.52
MSH3-201ENST00000265081 RASA2Q15283 850 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 TTC19Q6DKK2 380 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms