RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 WHAMMQ8TF30 809 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 LINC01599Q8WXQ3 324 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 PGBD4Q96DM1 585 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 ZNF560Q96MR9 790 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 RPS6KC1Q96S38 1066 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 GOLGA2P5Q9HBQ8 144 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 THAP12O43422 761 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 BUB1O43683 1085 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 CYP1A1P04798 512 aaPredicted RBP24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 UNGP13051 313 aaPredicted RBP24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 PNPLA4P41247 253 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 AFF1P51825 1210 aaKnown RBP24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 ATN1P54259 1190 aaPredicted RBP24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 ZNF394Q53GI3 561 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 C1orf53Q5VUE5 145 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 TRIM72Q6ZMU5 477 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 TTC39CQ8N584 583 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 ZNF606Q8WXB4 792 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 CTNNBL1Q8WYA6 563 aaPredicted RBP24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 RSAD1Q9HA92 442 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 MIOSQ9NXC5 875 aa24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.43■■□□□ 1.5
SMARCB1-201ENST00000263121 CTAGE9A4FU28 777 aa24.42■■□□□ 1.5
SMARCB1-201ENST00000263121 C9IYK1 514 aa24.42■■□□□ 1.5
SMARCB1-201ENST00000263121 NBNO60934 754 aa24.42■■□□□ 1.5
SMARCB1-201ENST00000263121 PAEPP09466 180 aa24.42■■□□□ 1.5
SMARCB1-201ENST00000263121 RAD23BP54727 409 aa24.42■■□□□ 1.5
SMARCB1-201ENST00000263121 ACAD10Q6JQN1 1059 aa24.42■■□□□ 1.5
SMARCB1-201ENST00000263121 NAPGQ99747 312 aaPredicted RBP24.42■■□□□ 1.5
SMARCB1-201ENST00000263121 ZSWIM1Q9BR11 485 aa24.42■■□□□ 1.5
SMARCB1-201ENST00000263121 UBN1Q9NPG3 1134 aa24.42■■□□□ 1.5
SMARCB1-201ENST00000263121 SNX9Q9Y5X1 595 aa24.42■■□□□ 1.5
SMARCB1-201ENST00000263121 TANC1Q9C0D5 1861 aa24.42■■□□□ 1.5
SMARCB1-201ENST00000263121 THP07101 528 aa24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 CFHP08603 1231 aa24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 ABCB4P21439 1286 aa24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 GJA8P48165 433 aa24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 CTCFP49711 727 aaPredicted RBP24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 TOX2Q96NM4 488 aa24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 ALS2CR12Q96Q35 445 aa24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 TWNKQ96RR1 684 aa24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 MMS19Q96T76 1030 aa24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 FTHL17Q9BXU8 183 aa24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 THAP2Q9H0W7 228 aa24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 L2HGDHQ9H9P8 463 aa24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 GDAP2Q9NXN4 497 aa24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 HMGXB4Q9UGU5 601 aa24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 BARX2Q9UMQ3 279 aaPredicted RBP24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 PCDHGC5Q9Y5F6 944 aa24.41■■□□□ 1.5
SMARCB1-201ENST00000263121 SPTLC1O15269 473 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 TAF6P49848 677 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 SCNN1GP51170 649 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 FAM189BP81408 668 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 SLC24A5Q71RS6 500 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 ANKLE1Q8NAG6 615 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 SLC4A11Q8NBS3 891 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 RNF169Q8NCN4 708 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 DIS3LQ8TF46 1054 aaKnown RBP24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 RFFLQ8WZ73 363 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 TFAP2BQ92481 460 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 ARHGEF26Q96DR7 871 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 ELOVL4Q9GZR5 314 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 TSPYL2Q9H2G4 693 aaPredicted RBP24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 PUF60Q9UHX1 559 aaKnown RBP24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 INPPL1O15357 1258 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 BRD2P25440 801 aaKnown RBP24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 CENPCQ03188 943 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 FAAP100Q0VG06 881 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 TCEAL1Q15170 157 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 SV2CQ496J9 727 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 PLEKHG4Q58EX7 1191 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 FAM43BQ6ZT52 329 aaPredicted RBP24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 PCDHGC3Q9UN70 934 aa24.4■■□□□ 1.5
SMARCB1-201ENST00000263121 DCDC2CA8MYV0 355 aa24.39■■□□□ 1.49
SMARCB1-201ENST00000263121 KPNA7A9QM74 516 aa24.39■■□□□ 1.49
SMARCB1-201ENST00000263121 URI1O94763 535 aaPredicted RBP24.39■■□□□ 1.49
SMARCB1-201ENST00000263121 EOMESO95936 686 aa24.39■■□□□ 1.49
SMARCB1-201ENST00000263121 HSPA1AP0DMV8 641 aaKnown RBP24.39■■□□□ 1.49
SMARCB1-201ENST00000263121 HSPA1BP0DMV9 641 aaKnown RBP24.39■■□□□ 1.49
SMARCB1-201ENST00000263121 NAP1L1P55209 391 aaKnown RBP24.39■■□□□ 1.49
SMARCB1-201ENST00000263121 NOMO3P69849 1222 aa24.39■■□□□ 1.49
SMARCB1-201ENST00000263121 IFI16Q16666 785 aaKnown RBP24.39■■□□□ 1.49
SMARCB1-201ENST00000263121 TRIM60Q495X7 471 aa24.39■■□□□ 1.49
SMARCB1-201ENST00000263121 LIMS2Q7Z4I7 341 aa24.39■■□□□ 1.49
SMARCB1-201ENST00000263121 CYFIP2Q96F07 1278 aa24.39■■□□□ 1.49
SMARCB1-201ENST00000263121 TMEM176AQ96HP8 235 aa24.39■■□□□ 1.49
SMARCB1-201ENST00000263121 PDCL3Q9H2J4 239 aa24.39■■□□□ 1.49
SMARCB1-201ENST00000263121 FAM170AA1A519 330 aa24.38■■□□□ 1.49
SMARCB1-201ENST00000263121 RIOK3O14730 519 aaKnown RBP24.38■■□□□ 1.49
SMARCB1-201ENST00000263121 NDST1P52848 882 aa24.38■■□□□ 1.49
SMARCB1-201ENST00000263121 GPC5P78333 572 aa24.38■■□□□ 1.49
SMARCB1-201ENST00000263121 TLE2Q04725 743 aa24.38■■□□□ 1.49
SMARCB1-201ENST00000263121 MRPL45Q9BRJ2 306 aaKnown RBP24.38■■□□□ 1.49
SMARCB1-201ENST00000263121 GRID2IPA4D2P6 1211 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 LILRA4P59901 499 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 SOWAHAQ2M3V2 549 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 NAA35Q5VZE5 725 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 PASD1Q8IV76 773 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 TPCN2Q8NHX9 752 aa24.37■■□□□ 1.49
SMARCB1-201ENST00000263121 SLC35G2Q8TBE7 412 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms