RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SH3KBP1Q96B97 665 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 MAGEB5Q9BZ81 275 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 TMBIM4Q9HC24 238 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 SLC39A10Q9ULF5 831 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 DTNAQ9Y4J8 743 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 TSC22D2O75157 780 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 HOXA7P31268 230 aaPredicted RBP12.62□□□□□ -0.39
SMG6-201ENST00000263073 TNFAIP2Q03169 654 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 KRT72Q14CN4 511 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 SLC44A4Q53GD3 710 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 DPY19L2Q6NUT2 758 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 GIMAP8Q8ND71 665 aaPredicted RBP12.62□□□□□ -0.39
SMG6-201ENST00000263073 DTNBP1Q96EV8 351 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 CALR3Q96L12 384 aaKnown RBP12.62□□□□□ -0.39
SMG6-201ENST00000263073 WRNIP1Q96S55 665 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 ARHGEF38Q9NXL2 777 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 ITM2BQ9Y287 266 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 A0A087X0T9 212 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 RSPH10B2B2RC85 870 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 ECE2O60344 883 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 FAM228BP0C875 321 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 RSPH10BP0C881 870 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 KRT76Q01546 638 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 TSGA10IPQ3SY00 556 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 KCNT1Q5JUK3 1230 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 RC3H1Q5TC82 1133 aaKnown RBP12.61□□□□□ -0.39
SMG6-201ENST00000263073 MEI1Q5TIA1 1274 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 NLRP9Q7RTR0 991 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 EPB41L4AQ9HCS5 686 aaPredicted RBP12.61□□□□□ -0.39
SMG6-201ENST00000263073 PDE5AO76074 875 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 MAPK10P53779 464 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 SPP2Q13103 211 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 KLHDC7AQ5VTJ3 777 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 TMED8Q6PL24 325 aaPredicted RBP12.61□□□□□ -0.39
SMG6-201ENST00000263073 CCDC60Q8IWA6 550 aaPredicted RBP12.61□□□□□ -0.39
SMG6-201ENST00000263073 BBS2Q9BXC9 721 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 SNX9Q9Y5X1 595 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 IFNA8P32881 189 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 OTUD4Q01804 1114 aaKnown RBP12.61□□□□□ -0.39
SMG6-201ENST00000263073 ENGASEQ8NFI3 743 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 CMTM5Q96DZ9 223 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 PALLDQ8WX93 1383 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 MAGEA13PA6NCF6 341 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 SLC16A3O15427 465 aaKnown RBP12.61□□□□□ -0.39
SMG6-201ENST00000263073 SGPL1O95470 568 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 GTF2H1P32780 548 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 ETFBP38117 255 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 CLK1P49759 484 aaKnown RBP12.61□□□□□ -0.39
SMG6-201ENST00000263073 GEMIN4P57678 1058 aaKnown RBP12.61□□□□□ -0.39
SMG6-201ENST00000263073 ZNF235Q14590 738 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 RNF219Q5W0B1 726 aaPredicted RBP12.61□□□□□ -0.39
SMG6-201ENST00000263073 TRIM72Q6ZMU5 477 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 SYDE1Q6ZW31 735 aaPredicted RBP12.61□□□□□ -0.39
SMG6-201ENST00000263073 RRM2BQ7LG56 351 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 PRCCQ92733 491 aaPredicted RBP12.61□□□□□ -0.39
SMG6-201ENST00000263073 HIC2Q96JB3 615 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 EPAS1Q99814 870 aa12.61□□□□□ -0.39
SMG6-201ENST00000263073 DMGDHQ9UI17 866 aaKnown RBP12.61□□□□□ -0.39
SMG6-201ENST00000263073 AGRPO00253 132 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 ATP9AO75110 1047 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 SASH3O75995 380 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 GLI1P08151 1106 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 GLRBP48167 497 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 NCOA4Q13772 614 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 TRIM25Q14258 630 aaKnown RBP12.6□□□□□ -0.39
SMG6-201ENST00000263073 ZSWIM2Q8NEG5 633 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 IPMKQ8NFU5 416 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 NSUN6Q8TEA1 469 aaKnown RBP12.6□□□□□ -0.39
SMG6-201ENST00000263073 BTN2A2Q8WVV5 523 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 TOPORSQ9NS56 1045 aaPredicted RBP12.6□□□□□ -0.39
SMG6-201ENST00000263073 ATF5Q9Y2D1 282 aaPredicted RBP12.6□□□□□ -0.39
SMG6-201ENST00000263073 MAFGO15525 162 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 ALX1Q15699 326 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 USP13Q92995 863 aaPredicted RBP12.6□□□□□ -0.39
SMG6-201ENST00000263073 PABPC5Q96DU9 382 aaKnown RBP12.6□□□□□ -0.39
SMG6-201ENST00000263073 CCSER1Q9C0I3 900 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 CDV3Q9UKY7 258 aaKnown RBP12.6□□□□□ -0.39
SMG6-201ENST00000263073 PYGLP06737 847 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 PPP3CCP48454 512 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 USP11P51784 963 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 COPAP53621 1224 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 IZUMO2Q6UXV1 221 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 HDAC7Q8WUI4 952 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 OSGEPQ9NPF4 335 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 USE1Q9NZ43 259 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 HPS5Q9UPZ3 1129 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 AK9Q5TCS8 1911 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 NBPF26B4DH59 902 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 KLHL2O95198 593 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 ASNSP08243 561 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 SNRPAP09012 282 aaKnown RBP12.6□□□□□ -0.39
SMG6-201ENST00000263073 OCM2P0CE71 109 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 OCMP0CE72 109 aaPredicted RBP12.6□□□□□ -0.39
SMG6-201ENST00000263073 LAMB3Q13751 1172 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 LDHDQ86WU2 507 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 NBPF15Q8N660 670 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 LACRTQ9GZZ8 138 aa12.6□□□□□ -0.39
SMG6-201ENST00000263073 DDX20Q9UHI6 824 aaKnown RBP12.6□□□□□ -0.39
SMG6-201ENST00000263073 NCF1BA6NI72 391 aaPredicted RBP12.6□□□□□ -0.39
SMG6-201ENST00000263073 NCF1CA8MVU1 366 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms