RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 USP38Q8NB14 1042 aa8.8□□□□□ -1
LDB3-201ENST00000263066 PPP1R14CQ8TAE6 165 aa8.8□□□□□ -1
LDB3-201ENST00000263066 GRAMD1AQ96CP6 724 aa8.8□□□□□ -1
LDB3-201ENST00000263066 MTBPQ96DY7 904 aa8.8□□□□□ -1
LDB3-201ENST00000263066 CCDC138Q96M89 665 aa8.8□□□□□ -1
LDB3-201ENST00000263066 PRPF18Q99633 342 aaKnown RBP8.8□□□□□ -1
LDB3-201ENST00000263066 PTTG2Q9NZH5 202 aa8.8□□□□□ -1
LDB3-201ENST00000263066 RWDD2AQ9UIY3 292 aa8.8□□□□□ -1
LDB3-201ENST00000263066 SYNPO2Q9UMS6 1093 aa8.8□□□□□ -1
LDB3-201ENST00000263066 NOC2LQ9Y3T9 749 aaKnown RBP8.8□□□□□ -1
LDB3-201ENST00000263066 PCDHB6Q9Y5E3 794 aa8.8□□□□□ -1
LDB3-201ENST00000263066 RASA4BC9J798 803 aa8.8□□□□□ -1
LDB3-201ENST00000263066 RASA4O43374 803 aa8.8□□□□□ -1
LDB3-201ENST00000263066 MAN1A2O60476 641 aa8.8□□□□□ -1
LDB3-201ENST00000263066 KRT5P13647 590 aa8.8□□□□□ -1
LDB3-201ENST00000263066 FDPSP14324 419 aaKnown RBP8.8□□□□□ -1
LDB3-201ENST00000263066 COPB2P35606 906 aa8.8□□□□□ -1
LDB3-201ENST00000263066 POLR2FP61218 127 aaKnown RBP8.8□□□□□ -1
LDB3-201ENST00000263066 PLEKHA7Q6IQ23 1121 aa8.8□□□□□ -1
LDB3-201ENST00000263066 TAS2R42Q7RTR8 314 aa8.8□□□□□ -1
LDB3-201ENST00000263066 MTDHQ86UE4 582 aaKnown RBP8.8□□□□□ -1
LDB3-201ENST00000263066 CROCCP3Q8IVE0 287 aa8.8□□□□□ -1
LDB3-201ENST00000263066 METTL13Q8N6R0 699 aa8.8□□□□□ -1
LDB3-201ENST00000263066 HPS1Q92902 700 aa8.8□□□□□ -1
LDB3-201ENST00000263066 COX4I2Q96KJ9 171 aa8.8□□□□□ -1
LDB3-201ENST00000263066 AMNQ9BXJ7 453 aa8.8□□□□□ -1
LDB3-201ENST00000263066 TLR10Q9BXR5 811 aa8.8□□□□□ -1
LDB3-201ENST00000263066 SCHIP1Q9P0W5 487 aaPredicted RBP8.8□□□□□ -1
LDB3-201ENST00000263066 FAM198AQ9UFP1 575 aa8.8□□□□□ -1
LDB3-201ENST00000263066 COL5A3P25940 1745 aaPredicted RBP8.8□□□□□ -1
LDB3-201ENST00000263066 BICDL2A1A5D9 508 aa8.8□□□□□ -1
LDB3-201ENST00000263066 PGK2P07205 417 aa8.8□□□□□ -1
LDB3-201ENST00000263066 GEMIN4P57678 1058 aaKnown RBP8.8□□□□□ -1
LDB3-201ENST00000263066 ANTXR2P58335 489 aa8.8□□□□□ -1
LDB3-201ENST00000263066 KRT76Q01546 638 aa8.8□□□□□ -1
LDB3-201ENST00000263066 QRICH1Q2TAL8 776 aa8.8□□□□□ -1
LDB3-201ENST00000263066 WDR45BQ5MNZ6 344 aa8.8□□□□□ -1
LDB3-201ENST00000263066 FOXB2Q5VYV0 432 aa8.8□□□□□ -1
LDB3-201ENST00000263066 PPP2R2DQ66LE6 453 aa8.8□□□□□ -1
LDB3-201ENST00000263066 DTHD1Q6ZMT9 781 aa8.8□□□□□ -1
LDB3-201ENST00000263066 LPCAT2Q7L5N7 544 aa8.8□□□□□ -1
LDB3-201ENST00000263066 EPM2AIP1Q7L775 607 aaPredicted RBP8.8□□□□□ -1
LDB3-201ENST00000263066 TMC3Q7Z5M5 1100 aa8.8□□□□□ -1
LDB3-201ENST00000263066 MKL1Q969V6 931 aa8.8□□□□□ -1
LDB3-201ENST00000263066 CDHR1Q96JP9 859 aa8.8□□□□□ -1
LDB3-201ENST00000263066 ZDHHC15Q96MV8 337 aa8.8□□□□□ -1
LDB3-201ENST00000263066 RUNDC3BQ96NL0 473 aa8.8□□□□□ -1
LDB3-201ENST00000263066 AGAP3Q96P47 875 aa8.8□□□□□ -1
LDB3-201ENST00000263066 VPS37BQ9H9H4 285 aa8.8□□□□□ -1
LDB3-201ENST00000263066 PLGRKTQ9HBL7 147 aa8.8□□□□□ -1
LDB3-201ENST00000263066 PCDH12Q9NPG4 1184 aa8.8□□□□□ -1
LDB3-201ENST00000263066 MTMR4Q9NYA4 1195 aa8.8□□□□□ -1
LDB3-201ENST00000263066 WASF2Q9Y6W5 498 aa8.8□□□□□ -1
LDB3-201ENST00000263066 MYH14Q7Z406 1995 aaKnown RBP8.8□□□□□ -1
LDB3-201ENST00000263066 GOLGA8JA6NMD2 632 aa8.8□□□□□ -1
LDB3-201ENST00000263066 B2RBV5 119 aa8.8□□□□□ -1
LDB3-201ENST00000263066 H3BRJ5 948 aa8.8□□□□□ -1
LDB3-201ENST00000263066 TRMUO75648 421 aaKnown RBP8.8□□□□□ -1
LDB3-201ENST00000263066 USP1O94782 785 aa8.8□□□□□ -1
LDB3-201ENST00000263066 ALADP13716 330 aa8.8□□□□□ -1
LDB3-201ENST00000263066 RAP1GDS1P52306 607 aa8.8□□□□□ -1
LDB3-201ENST00000263066 PDE4DQ08499 809 aa8.8□□□□□ -1
LDB3-201ENST00000263066 AP1B1Q10567 949 aa8.8□□□□□ -1
LDB3-201ENST00000263066 NONOQ15233 471 aaKnown RBP eCLIP8.8□□□□□ -1
LDB3-201ENST00000263066 TTC38Q5R3I4 469 aa8.8□□□□□ -1
LDB3-201ENST00000263066 SFR1Q86XK3 245 aa8.8□□□□□ -1
LDB3-201ENST00000263066 MAML1Q92585 1016 aa8.8□□□□□ -1
LDB3-201ENST00000263066 CENPTQ96BT3 561 aa8.8□□□□□ -1
LDB3-201ENST00000263066 CALML4Q96GE6 196 aa8.8□□□□□ -1
LDB3-201ENST00000263066 VPS50Q96JG6 964 aa8.8□□□□□ -1
LDB3-201ENST00000263066 C10orf88Q9H8K7 445 aa8.8□□□□□ -1
LDB3-201ENST00000263066 LY9Q9HBG7 655 aa8.8□□□□□ -1
LDB3-201ENST00000263066 ALG13Q9NP73 1137 aaKnown RBP8.8□□□□□ -1
LDB3-201ENST00000263066 TIMMDC1Q9NPL8 285 aa8.8□□□□□ -1
LDB3-201ENST00000263066 ZNF229Q9UJW7 825 aa8.8□□□□□ -1
LDB3-201ENST00000263066 GRID2IPA4D2P6 1211 aa8.79□□□□□ -1
LDB3-201ENST00000263066 LRRC53A6NM62 1247 aa8.79□□□□□ -1
LDB3-201ENST00000263066 PEX14O75381 377 aa8.79□□□□□ -1
LDB3-201ENST00000263066 ZBTB11O95625 1053 aaPredicted RBP8.79□□□□□ -1
LDB3-201ENST00000263066 RPN1P04843 607 aaKnown RBP8.79□□□□□ -1
LDB3-201ENST00000263066 HSPA1AP0DMV8 641 aaKnown RBP8.79□□□□□ -1
LDB3-201ENST00000263066 HSPA1BP0DMV9 641 aaKnown RBP8.79□□□□□ -1
LDB3-201ENST00000263066 ABCB4P21439 1286 aa8.79□□□□□ -1
LDB3-201ENST00000263066 PRKACBP22694 351 aa8.79□□□□□ -1
LDB3-201ENST00000263066 EEF1GP26641 437 aaKnown RBP8.79□□□□□ -1
LDB3-201ENST00000263066 PTGER2P43116 358 aa8.79□□□□□ -1
LDB3-201ENST00000263066 RPL5P46777 297 aaKnown RBP8.79□□□□□ -1
LDB3-201ENST00000263066 ITPRIPL1Q6GPH6 555 aa8.79□□□□□ -1
LDB3-201ENST00000263066 RFWD3Q6PCD5 774 aa8.79□□□□□ -1
LDB3-201ENST00000263066 DSTYKQ6XUX3 929 aa8.79□□□□□ -1
LDB3-201ENST00000263066 NLRP9Q7RTR0 991 aa8.79□□□□□ -1
LDB3-201ENST00000263066 ADGRF4Q8IZF3 695 aa8.79□□□□□ -1
LDB3-201ENST00000263066 CDCA5Q96FF9 252 aa8.79□□□□□ -1
LDB3-201ENST00000263066 TSG101Q99816 390 aa8.79□□□□□ -1
LDB3-201ENST00000263066 ECSITQ9BQ95 431 aa8.79□□□□□ -1
LDB3-201ENST00000263066 GPATCH1Q9BRR8 931 aaKnown RBP8.79□□□□□ -1
LDB3-201ENST00000263066 SNX25Q9H3E2 840 aa8.79□□□□□ -1
LDB3-201ENST00000263066 BCAP29Q9UHQ4 241 aa8.79□□□□□ -1
LDB3-201ENST00000263066 AMFRQ9UKV5 643 aa8.79□□□□□ -1
LDB3-201ENST00000263066 SALL3Q9BXA9 1300 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms