RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 SPG21Q9NZD8 308 aa26.11■■□□□ 1.77
SCN1B-201ENST00000262631 MTUS1Q9ULD2 1270 aa26.11■■□□□ 1.77
SCN1B-201ENST00000262631 PCDHB12Q9Y5F1 795 aa26.11■■□□□ 1.77
SCN1B-201ENST00000262631 GBF1Q92538 1859 aa26.11■■□□□ 1.77
SCN1B-201ENST00000262631 P4HA1P13674 534 aa26.1■■□□□ 1.77
SCN1B-201ENST00000262631 TAP1Q03518 808 aa26.1■■□□□ 1.77
SCN1B-201ENST00000262631 ARHGAP44Q17R89 818 aa26.1■■□□□ 1.77
SCN1B-201ENST00000262631 WSCD1Q658N2 575 aa26.1■■□□□ 1.77
SCN1B-201ENST00000262631 TAS1R1Q7RTX1 841 aa26.1■■□□□ 1.77
SCN1B-201ENST00000262631 PDCL2Q8N4E4 241 aa26.1■■□□□ 1.77
SCN1B-201ENST00000262631 B3GALT6Q96L58 329 aa26.1■■□□□ 1.77
SCN1B-201ENST00000262631 MRPL45Q9BRJ2 306 aaKnown RBP26.1■■□□□ 1.77
SCN1B-201ENST00000262631 GPR88Q9GZN0 384 aa26.1■■□□□ 1.77
SCN1B-201ENST00000262631 FBXL5Q9UKA1 691 aa26.1■■□□□ 1.77
SCN1B-201ENST00000262631 SF3B1O75533 1304 aaKnown RBP eCLIP26.1■■□□□ 1.778e-6■■■■■ 107
SCN1B-201ENST00000262631 TBXAS1P24557 533 aaPredicted RBP26.09■■□□□ 1.77
SCN1B-201ENST00000262631 CDC25BP30305 580 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 BMPR1AP36894 532 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 RAPGEF1Q13905 1077 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 FIGNQ5HY92 759 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 APPL2Q8NEU8 664 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 KBTBD7Q8WVZ9 684 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 NKX2-4Q9H2Z4 354 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 CEP72Q9P209 647 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 COLQQ9Y215 455 aaPredicted RBP26.09■■□□□ 1.77
SCN1B-201ENST00000262631 HUS1O60921 280 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 PNMA6AP0CW24 399 aaPredicted RBP26.09■■□□□ 1.77
SCN1B-201ENST00000262631 CD58P19256 250 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 ACO1P21399 889 aaKnown RBP26.09■■□□□ 1.77
SCN1B-201ENST00000262631 TKTP29401 623 aaKnown RBP26.09■■□□□ 1.77
SCN1B-201ENST00000262631 CTNNB1P35222 781 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 FXR1P51114 621 aaKnown RBP eCLIP26.09■■□□□ 1.77
SCN1B-201ENST00000262631 FAM171A1Q5VUB5 890 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 KLHL23Q8NBE8 558 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 SPC24Q8NBT2 197 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 CPLX3Q8WVH0 158 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 TMEM169Q96HH4 297 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 FAXDC2Q96IV6 333 aa26.09■■□□□ 1.77
SCN1B-201ENST00000262631 TRAPPC3O43617 180 aa26.08■■□□□ 1.77
SCN1B-201ENST00000262631 FGF18O76093 207 aa26.08■■□□□ 1.77
SCN1B-201ENST00000262631 PAX3P23760 479 aa26.08■■□□□ 1.77
SCN1B-201ENST00000262631 MFAP3P55082 362 aa26.08■■□□□ 1.77
SCN1B-201ENST00000262631 TBX2Q13207 712 aaPredicted RBP26.08■■□□□ 1.77
SCN1B-201ENST00000262631 DRAP1Q14919 205 aaPredicted RBP26.08■■□□□ 1.77
SCN1B-201ENST00000262631 RNF168Q8IYW5 571 aaPredicted RBP26.08■■□□□ 1.77
SCN1B-201ENST00000262631 TOP6BLQ8N6T0 577 aa26.08■■□□□ 1.77
SCN1B-201ENST00000262631 UBR7Q8N806 425 aa26.08■■□□□ 1.77
SCN1B-201ENST00000262631 BAP1Q92560 729 aa26.08■■□□□ 1.77
SCN1B-201ENST00000262631 NUP58Q9BVL2 599 aa26.08■■□□□ 1.77
SCN1B-201ENST00000262631 CISHQ9NSE2 258 aa26.08■■□□□ 1.77
SCN1B-201ENST00000262631 MSRAQ9UJ68 235 aa26.08■■□□□ 1.77
SCN1B-201ENST00000262631 NME7Q9Y5B8 376 aa26.08■■□□□ 1.77
SCN1B-201ENST00000262631 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.08■■□□□ 1.77
SCN1B-201ENST00000262631 HCRTO43612 131 aa26.07■■□□□ 1.76
SCN1B-201ENST00000262631 ODC1P11926 461 aa26.07■■□□□ 1.76
SCN1B-201ENST00000262631 RFX1P22670 979 aa26.07■■□□□ 1.76
SCN1B-201ENST00000262631 PPM1AP35813 382 aa26.07■■□□□ 1.76
SCN1B-201ENST00000262631 RAB30Q15771 203 aa26.07■■□□□ 1.76
SCN1B-201ENST00000262631 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.07■■□□□ 1.76
SCN1B-201ENST00000262631 GPIHBP1Q8IV16 184 aa26.07■■□□□ 1.76
SCN1B-201ENST00000262631 DRC7Q8IY82 874 aa26.07■■□□□ 1.76
SCN1B-201ENST00000262631 ADGRF2Q8IZF7 708 aa26.07■■□□□ 1.76
SCN1B-201ENST00000262631 STK33Q9BYT3 514 aa26.07■■□□□ 1.76
SCN1B-201ENST00000262631 CYP3A43Q9HB55 503 aa26.07■■□□□ 1.76
SCN1B-201ENST00000262631 HMGXB4Q9UGU5 601 aa26.07■■□□□ 1.76
SCN1B-201ENST00000262631 PCDHB8Q9UN66 801 aa26.07■■□□□ 1.76
SCN1B-201ENST00000262631 FOXN3O00409 490 aaPredicted RBP26.06■■□□□ 1.76
SCN1B-201ENST00000262631 DNAJB2P25686 324 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 CASP14P31944 242 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 JAM2P57087 298 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 GOLGA8FQ08AF8 430 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 GOLGA8DPQ0D2H9 430 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 ENOSF1Q7L5Y1 443 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 DPH6Q7L8W6 267 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 CACNA2D4Q7Z3S7 1137 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 OSTM1Q86WC4 334 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 CARNS1A5YM72 827 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 F8VZ95 297 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 TACC1O75410 805 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 CYP11A1P05108 521 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 FGFR3P22607 806 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 CEP57Q86XR8 500 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 SHC3Q92529 594 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 TGS1Q96RS0 853 aaKnown RBP26.06■■□□□ 1.76
SCN1B-201ENST00000262631 CERS4Q9HA82 394 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 CAPN11Q9UMQ6 739 aa26.06■■□□□ 1.76
SCN1B-201ENST00000262631 A0A1W2PQJ5 194 aa26.05■■□□□ 1.76
SCN1B-201ENST00000262631 C5orf67F2Z3F1 127 aa26.05■■□□□ 1.76
SCN1B-201ENST00000262631 LMO2P25791 158 aa26.05■■□□□ 1.76
SCN1B-201ENST00000262631 PLCB3Q01970 1234 aa26.05■■□□□ 1.76
SCN1B-201ENST00000262631 INCA1Q0VD86 236 aa26.05■■□□□ 1.76
SCN1B-201ENST00000262631 ORC1Q13415 861 aa26.05■■□□□ 1.76
SCN1B-201ENST00000262631 RTP2Q5QGT7 225 aa26.05■■□□□ 1.76
SCN1B-201ENST00000262631 PPP2R2DQ66LE6 453 aa26.05■■□□□ 1.76
SCN1B-201ENST00000262631 DDX53Q86TM3 631 aaKnown RBP26.05■■□□□ 1.76
SCN1B-201ENST00000262631 TWNKQ96RR1 684 aa26.05■■□□□ 1.76
SCN1B-201ENST00000262631 ALG13Q9NP73 1137 aaKnown RBP26.05■■□□□ 1.76
SCN1B-201ENST00000262631 RWDD3Q9Y3V2 267 aa26.05■■□□□ 1.76
SCN1B-201ENST00000262631 GABRDO14764 452 aa26.04■■□□□ 1.76
SCN1B-201ENST00000262631 SYN3O14994 580 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms