RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 C1orf112Q9NSG2 853 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 SPATS2LQ9NUQ6 558 aaKnown RBP10.65□□□□□ -0.7
LIG3-201ENST00000262327 PTPRJQ12913 1337 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 SCN4AP35499 1836 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 ZNF862O60290 1169 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 GSTA1P08263 222 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 MUTP22033 750 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 GCKP35557 465 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 HSD17B4P51659 736 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 TCEAL1Q15170 157 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 ARMC3Q5W041 872 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 MIS18BP1Q6P0N0 1132 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 ZNF449Q6P9G9 518 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 C12orf56Q8IXR9 622 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 WRNIP1Q96S55 665 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 ETNK1Q9HBU6 452 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 ADAM22Q9P0K1 906 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 SAE1Q9UBE0 346 aaPredicted RBP10.65□□□□□ -0.7
LIG3-201ENST00000262327 DNPEPQ9ULA0 475 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 ARL2BPQ9Y2Y0 163 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 SSC5DA1L4H1 1573 aa10.65□□□□□ -0.71
LIG3-201ENST00000262327 EXOC1LA0A1B0GW35 172 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 WDR46O15213 610 aaKnown RBP10.64□□□□□ -0.71
LIG3-201ENST00000262327 ICAM1P05362 532 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 TAC1P20366 129 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 TARSP26639 723 aaKnown RBP10.64□□□□□ -0.71
LIG3-201ENST00000262327 MAGEA4P43358 317 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 NLRP11P59045 1033 aaKnown RBP10.64□□□□□ -0.71
LIG3-201ENST00000262327 PSMC5P62195 406 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 NOP14P78316 857 aaKnown RBP10.64□□□□□ -0.71
LIG3-201ENST00000262327 GAD2Q05329 585 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 BNIP1Q12981 228 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 PKN2Q16513 984 aaKnown RBP10.64□□□□□ -0.71
LIG3-201ENST00000262327 TXNRD3NBQ6F5E7 133 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 SWSAP1Q6NVH7 229 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 CROCCP2Q86T23 111 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 ANKMY2Q8IV38 441 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 MAP4K3Q8IVH8 894 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 VPS37BQ9H9H4 285 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 KLHL14Q9P2G3 628 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 ZNF148Q9UQR1 794 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 PCDHB4Q9Y5E5 795 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 UBIAD1Q9Y5Z9 338 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 WDR90Q96KV7 1748 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 TLR3O15455 904 aaKnown RBP10.64□□□□□ -0.71
LIG3-201ENST00000262327 HLA-DRAP01903 254 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 PTPRAP18433 802 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 KRT15P19012 456 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 PIK3CAP42336 1068 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 DYNLT1P63172 113 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 PLCB3Q01970 1234 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 ALCAMQ13740 583 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 PGM5Q15124 567 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 GALNTL6Q49A17 601 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 SYCP2LQ5T4T6 812 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 KLF6Q99612 283 aaPredicted RBP10.64□□□□□ -0.71
LIG3-201ENST00000262327 ALG13Q9NP73 1137 aaKnown RBP10.64□□□□□ -0.71
LIG3-201ENST00000262327 EXOC7Q9UPT5 735 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.64□□□□□ -0.71
LIG3-201ENST00000262327 RBBP6Q7Z6E9 1792 aaKnown RBP10.64□□□□□ -0.71
LIG3-201ENST00000262327 USP2O75604 605 aaPredicted RBP10.64□□□□□ -0.71
LIG3-201ENST00000262327 PRAMEF18Q5VWM3 479 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 PCNX4Q63HM2 1172 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 GPD1LQ8N335 351 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.64□□□□□ -0.71
LIG3-201ENST00000262327 MICAL1Q8TDZ2 1067 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 TMEM143Q96AN5 459 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 ERP27Q96DN0 273 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 FNBP1Q96RU3 617 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 MYLK2Q9H1R3 596 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 ANKFY1Q9P2R3 1169 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 SEPT9Q9UHD8 586 aaPredicted RBP10.64□□□□□ -0.71
LIG3-201ENST00000262327 HAO1Q9UJM8 370 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 GRID1Q9ULK0 1009 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 FZD1Q9UP38 647 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 COQ4Q9Y3A0 265 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 RIPK3Q9Y572 518 aa10.64□□□□□ -0.71
LIG3-201ENST00000262327 ZNFX1Q9P2E3 1918 aaKnown RBP10.63□□□□□ -0.71
LIG3-201ENST00000262327 A0A1B0GUA9 196 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 A0A1W2PPM1 405 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 C19orf81C9J6K1 198 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 GOLGA8RI6L899 631 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 PROSCO94903 275 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 MSH2P43246 934 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 GPS1Q13098 491 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 MTERF2Q49AM1 385 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 BRDTQ58F21 947 aaPredicted RBP10.63□□□□□ -0.71
LIG3-201ENST00000262327 ARHGEF16Q5VV41 709 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 TDRD10Q5VZ19 366 aaKnown RBP10.63□□□□□ -0.71
LIG3-201ENST00000262327 TLDC1Q6P9B6 456 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 TAS1R3Q7RTX0 852 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 VSIG1Q86XK7 387 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 VTI1AQ96AJ9 217 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 FAM167BQ9BTA0 163 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 ATP6V0A4Q9HBG4 840 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 APOBEC3GQ9HC16 384 aaKnown RBP10.63□□□□□ -0.71
LIG3-201ENST00000262327 CTDP1Q9Y5B0 961 aaPredicted RBP10.63□□□□□ -0.71
LIG3-201ENST00000262327 CFAP73A6NFT4 308 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 WDR64B1ANS9 1081 aa10.63□□□□□ -0.71
LIG3-201ENST00000262327 SOCS7O14512 581 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms