RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 CCDC134Q9H6E4 229 aa16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 PSMC3IPQ9P2W1 217 aaPredicted RBP16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 SMG5Q9UPR3 1016 aaKnown RBP16.77■□□□□ 0.27
PRPF40B-201ENST00000261897 BCL9LQ86UU0 1499 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 TCN1P20061 433 aaPredicted RBP16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 ARL4CP56559 192 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 LRRC43Q8N309 656 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 SENP7Q9BQF6 1050 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 PCSK1NQ9UHG2 260 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 GOLGB1Q14789 3259 aaKnown RBP16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 MYOCOSA0A1B0GUC4 107 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 TLR3O15455 904 aaKnown RBP16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 OAS1P00973 400 aaKnown RBP16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 ALCAMQ13740 583 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 BMPR2Q13873 1038 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 TMEM132AQ24JP5 1023 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 PPP6R3Q5H9R7 873 aaPredicted RBP16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 SH2D4BQ5SQS7 431 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 FAXCQ5TGI0 409 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 SEC14L1Q92503 715 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 CALN1Q9BXU9 219 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 RANBP17Q9H2T7 1088 aaKnown RBP16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 DMAP1Q9NPF5 467 aaPredicted RBP16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 GPRC5CQ9NQ84 441 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 FAM86B1E9PN63 330 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 GGPS1O95749 300 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 FAM86B2P0C5J1 330 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 ZNF543Q08ER8 600 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 PDK4Q16654 411 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 CBWD2Q8IUF1 395 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 KBTBD2Q8IY47 623 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 BBOF1Q8ND07 529 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 DNAAF2Q9NVR5 837 aaKnown RBP16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 SERPINB13Q9UIV8 391 aa16.76■□□□□ 0.27
PRPF40B-201ENST00000261897 GNPATO15228 680 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 JAM2P57087 298 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 EML3Q32P44 896 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 LIN52Q52LA3 116 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 KCNT1Q5JUK3 1230 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 FAM182BQ5T319 152 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 ARL10Q8N8L6 244 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 LRRN4Q8WUT4 740 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 PAFAH2Q99487 392 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 HERPUD2Q9BSE4 406 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 PRKAG3Q9UGI9 489 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 GRID1Q9ULK0 1009 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 PCDHA3Q9Y5H8 950 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 ADCY3O60266 1144 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 CAMTA2O94983 1202 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 ASMTLO95671 621 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 ANPEPP15144 967 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 RPA1P27694 616 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 SKIV2L2P42285 1042 aaKnown RBP16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 AQP5P55064 265 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 FOXB2Q5VYV0 432 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 CPXCR1Q8N123 301 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 CCDC33Q8N5R6 958 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 FAM81BQ96LP2 452 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 GAD2Q05329 585 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 HIC1Q14526 733 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 PLEKHG4Q58EX7 1191 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 FBXO27Q8NI29 283 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 EPS8L1Q8TE68 723 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 C10orf82Q8WW14 230 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 SUDS3Q9H7L9 328 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 C1orf112Q9NSG2 853 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 CHD4Q14839 1912 aa16.75■□□□□ 0.27
PRPF40B-201ENST00000261897 ARFGEF2Q9Y6D5 1785 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 NOP56O00567 594 aaKnown RBP16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 DGKIO75912 1065 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 MAN1A1P33908 653 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 HSPA2P54652 639 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 UBAP2LQ14157 1087 aaKnown RBP16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 COBLL1Q53SF7 1204 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 SLC45A4Q5BKX6 768 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 WDR44Q5JSH3 913 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 TEKT1Q969V4 418 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 OLFM3Q96PB7 478 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 PCDHB4Q9Y5E5 795 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 E7ENQ6 273 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 MSH4O15457 936 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 WFS1O76024 890 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 CD19P15391 556 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 CYP11B1P15538 503 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 NRLP54845 237 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 ZNF200P98182 395 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 CHI3L2Q15782 390 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 DOK7Q18PE1 504 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 OR52E8Q6IFG1 317 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 TMEM270Q6UE05 265 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 ARHGAP18Q8N392 663 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 RBM15BQ8NDT2 890 aaKnown RBP16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 PPM1HQ9ULR3 514 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 PCDHA2Q9Y5H9 948 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 NCANO14594 1321 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 SLC16A3O15427 465 aaKnown RBP16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 FGRP09769 529 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 GAP43P17677 238 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 PTK7Q13308 1070 aa16.74■□□□□ 0.27
PRPF40B-201ENST00000261897 SPDYCQ5MJ68 293 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms