RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 C1orf127Q8N9H9 656 aa12.48□□□□□ -0.41
PFDN1-201ENST00000261813 CXorf38Q8TB03 319 aa12.48□□□□□ -0.41
PFDN1-201ENST00000261813 ADAMTS19Q8TE59 1207 aa12.48□□□□□ -0.41
PFDN1-201ENST00000261813 PARD3BQ8TEW8 1205 aa12.48□□□□□ -0.41
PFDN1-201ENST00000261813 HERC2P3Q9BVR0 1158 aa12.48□□□□□ -0.41
PFDN1-201ENST00000261813 MTMR12Q9C0I1 747 aa12.48□□□□□ -0.41
PFDN1-201ENST00000261813 METTL14Q9HCE5 456 aaKnown RBP12.48□□□□□ -0.41
PFDN1-201ENST00000261813 TLR9Q9NR96 1032 aa12.48□□□□□ -0.41
PFDN1-201ENST00000261813 INTS13Q9NVM9 706 aa12.48□□□□□ -0.41
PFDN1-201ENST00000261813 DPP3Q9NY33 737 aa12.48□□□□□ -0.41
PFDN1-201ENST00000261813 LMCD1Q9NZU5 365 aa12.48□□□□□ -0.41
PFDN1-201ENST00000261813 PUF60Q9UHX1 559 aaKnown RBP12.48□□□□□ -0.41
PFDN1-201ENST00000261813 FRMD4BQ9Y2L6 1034 aa12.48□□□□□ -0.41
PFDN1-201ENST00000261813 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.48□□□□□ -0.41
PFDN1-201ENST00000261813 ANO9A1A5B4 782 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 LRRC10BA6NIK2 292 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 LRRIQ3A6PVS8 624 aaPredicted RBP12.47□□□□□ -0.41
PFDN1-201ENST00000261813 I3L4J1 428 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 PIRO00625 290 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 SERPINC1P01008 464 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 TMEM191BP0C7N4 346 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 ZNF18P17022 549 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 PSMC2P35998 433 aaKnown RBP12.47□□□□□ -0.41
PFDN1-201ENST00000261813 DLG4P78352 724 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 CCDC85BQ15834 202 aaPredicted RBP12.47□□□□□ -0.41
PFDN1-201ENST00000261813 C1orf220Q5T0J3 134 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 CDKAL1Q5VV42 579 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 PLPP4Q5VZY2 271 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 C9orf57Q5W0N0 161 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 AUTS2Q8WXX7 1259 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 ZNF516Q92618 1163 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 BORCS6Q96GS4 357 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 B3GALT6Q96L58 329 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 FNBP1Q96RU3 617 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 UHRF1Q96T88 793 aaPredicted RBP12.47□□□□□ -0.41
PFDN1-201ENST00000261813 TCF25Q9BQ70 676 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 MKNK1Q9BUB5 465 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 SIX4Q9UIU6 781 aa12.47□□□□□ -0.41
PFDN1-201ENST00000261813 SF3B1O75533 1304 aaKnown RBP eCLIP12.47□□□□□ -0.414e-6■■■■■ 111.2
PFDN1-201ENST00000261813 HIDE1A8MVS5 230 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 KCNJ18B7U540 433 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 SPTLC1O15269 473 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 SLC16A3O15427 465 aaKnown RBP12.46□□□□□ -0.41
PFDN1-201ENST00000261813 ITGB3P05106 788 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 CTSAP10619 480 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 TNNI1P19237 187 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 CLDN10P78369 228 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 BFSP1Q12934 665 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 KCNJ12Q14500 433 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 DUOXA2Q1HG44 320 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 TCP11X2Q5H9J9 407 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 INTS8Q75QN2 995 aaKnown RBP12.46□□□□□ -0.41
PFDN1-201ENST00000261813 TMC7Q7Z402 723 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 ADGRD2Q7Z7M1 963 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 USP37Q86T82 979 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 CACTINQ8WUQ7 758 aaKnown RBP12.46□□□□□ -0.41
PFDN1-201ENST00000261813 ANKRD36BP1Q96IX9 119 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 TRIM5Q9C035 493 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 ENTPD7Q9NQZ7 604 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 CHST7Q9NS84 486 aa12.46□□□□□ -0.41
PFDN1-201ENST00000261813 LIMA1Q9UHB6 759 aaKnown RBP12.46□□□□□ -0.41
PFDN1-201ENST00000261813 LILRB3O75022 631 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 TNNC2P02585 160 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 TRIM49P0CI25 452 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 TRIM49CP0CI26 452 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 EPB41P11171 864 aaKnown RBP12.45□□□□□ -0.42
PFDN1-201ENST00000261813 POLR2BP30876 1174 aaKnown RBP12.45□□□□□ -0.42
PFDN1-201ENST00000261813 AARSP49588 968 aaKnown RBP eCLIP12.45□□□□□ -0.423e-6■■■■■ 61.8
PFDN1-201ENST00000261813 VAMP7P51809 220 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 MARSP56192 900 aaKnown RBP12.45□□□□□ -0.42
PFDN1-201ENST00000261813 MCCD1P59942 119 aaPredicted RBP12.45□□□□□ -0.42
PFDN1-201ENST00000261813 FANCCQ00597 558 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 SMC1AQ14683 1233 aaKnown RBP12.45□□□□□ -0.42
PFDN1-201ENST00000261813 PTPN14Q15678 1187 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 AAK1Q2M2I8 961 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 TIGD5Q53EQ6 642 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 TCEAL5Q5H9L2 206 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 RTP2Q5QGT7 225 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 FAM171A1Q5VUB5 890 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 KIAA0319Q5VV43 1072 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 TRAPPC11Q7Z392 1133 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 FRMD5Q7Z6J6 570 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 MICALL1Q8N3F8 863 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 MICAL1Q8TDZ2 1067 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 NSUN3Q9H649 340 aaKnown RBP12.45□□□□□ -0.42
PFDN1-201ENST00000261813 NGRNQ9NPE2 291 aaKnown RBP12.45□□□□□ -0.42
PFDN1-201ENST00000261813 SAMSN1Q9NSI8 373 aaKnown RBP12.45□□□□□ -0.42
PFDN1-201ENST00000261813 STK39Q9UEW8 545 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 ITGA11Q9UKX5 1188 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 AGAP1Q9UPQ3 857 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 NUB1Q9Y5A7 615 aa12.45□□□□□ -0.42
PFDN1-201ENST00000261813 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.44□□□□□ -0.42
PFDN1-201ENST00000261813 C2orf71A6NGG8 1288 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 CXCL14O95715 111 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 CST3P01034 146 aaPredicted RBP12.44□□□□□ -0.42
PFDN1-201ENST00000261813 C4BPAP04003 597 aaKnown RBP12.44□□□□□ -0.42
PFDN1-201ENST00000261813 URODP06132 367 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 KRT19P08727 400 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 KRT13P13646 458 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 FGFR3P22607 806 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms