RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 NAB2Q15742 525 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 JADE1Q6IE81 842 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 NOTUMQ6P988 496 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 VPS36Q86VN1 386 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 GLYCTKQ8IVS8 523 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 FIBCD1Q8N539 461 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 FAM81BQ96LP2 452 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 GUCD1Q96NT3 240 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 TGS1Q96RS0 853 aaKnown RBP18.7■□□□□ 0.58
SRSF1-201ENST00000258962 PACSIN1Q9BY11 444 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 EIF2AQ9BY44 585 aaKnown RBP18.7■□□□□ 0.58
SRSF1-201ENST00000258962 PRDM12Q9H4Q4 367 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 ASB7Q9H672 318 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 ELAC1Q9H777 363 aaKnown RBP18.7■□□□□ 0.58
SRSF1-201ENST00000258962 CERS4Q9HA82 394 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 TMEM161AQ9NX61 479 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 SALL4Q9UJQ4 1053 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 NOCTQ9UK39 431 aaKnown RBP18.7■□□□□ 0.58
SRSF1-201ENST00000258962 MYH10P35580 1976 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 PTPRSQ13332 1948 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 ATP8B3O60423 1300 aa18.7■□□□□ 0.58
SRSF1-201ENST00000258962 TNNC2P02585 160 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 AXLP30530 894 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 USP8P40818 1118 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 MYL6P60660 151 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 CUL2Q13617 745 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 BTG3Q14201 252 aaPredicted RBP18.69■□□□□ 0.58
SRSF1-201ENST00000258962 ALKBH5Q6P6C2 394 aaKnown RBP18.69■□□□□ 0.58
SRSF1-201ENST00000258962 CRIPAKQ8N1N5 446 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 TMEM130Q8N3G9 435 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 SP7Q8TDD2 431 aaPredicted RBP18.69■□□□□ 0.58
SRSF1-201ENST00000258962 EPS8L1Q8TE68 723 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 ARNTL2Q8WYA1 636 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 ANKRD36BP1Q96IX9 119 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 ACAP3Q96P50 834 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 GAS2L1Q99501 681 aaPredicted RBP18.69■□□□□ 0.58
SRSF1-201ENST00000258962 AGPAT1Q99943 283 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 LUC7LQ9NQ29 371 aaKnown RBP18.69■□□□□ 0.58
SRSF1-201ENST00000258962 A0A0U1RQF3 1178 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 MACROD2A1Z1Q3 448 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 SKIP12755 728 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 CHRNB2P17787 502 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 ACO1P21399 889 aaKnown RBP18.69■□□□□ 0.58
SRSF1-201ENST00000258962 C10orf76Q5T2E6 689 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 NOP9Q86U38 636 aaKnown RBP18.69■□□□□ 0.58
SRSF1-201ENST00000258962 SLC47A2Q86VL8 602 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 DNAAF5Q86Y56 855 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 PALB2Q86YC2 1186 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 RNF169Q8NCN4 708 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 MYLIPQ8WY64 445 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 L2HGDHQ9H9P8 463 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 ACP6Q9NPH0 428 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 SIX4Q9UIU6 781 aa18.69■□□□□ 0.58
SRSF1-201ENST00000258962 SZT2Q5T011 3432 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 HOXA2O43364 376 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 ARHGEF15O94989 841 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 UBXN11Q5T124 520 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 APBB1IPQ7Z5R6 666 aaPredicted RBP18.68■□□□□ 0.58
SRSF1-201ENST00000258962 ECHDC2Q86YB7 292 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 TXLNBQ8N3L3 684 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 UBR7Q8N806 425 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 C1orf127Q8N9H9 656 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 MYRIPQ8NFW9 859 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 CXorf38Q8TB03 319 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 SECISBP2LQ93073 1101 aaKnown RBP18.68■□□□□ 0.58
SRSF1-201ENST00000258962 ZNF689Q96CS4 500 aaPredicted RBP18.68■□□□□ 0.58
SRSF1-201ENST00000258962 CCDC94Q9BW85 323 aaPredicted RBP18.68■□□□□ 0.58
SRSF1-201ENST00000258962 XYLT2Q9H1B5 865 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 CXCL16Q9H2A7 254 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 SNTG2Q9NY99 539 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 MTUS1Q9ULD2 1270 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 CAPN6Q9Y6Q1 641 aa18.68■□□□□ 0.58
SRSF1-201ENST00000258962 SLC34A2O95436 690 aa18.67■□□□□ 0.58
SRSF1-201ENST00000258962 EOMESO95936 686 aa18.67■□□□□ 0.58
SRSF1-201ENST00000258962 KRT5P13647 590 aa18.67■□□□□ 0.58
SRSF1-201ENST00000258962 TNFAIP3P21580 790 aa18.67■□□□□ 0.58
SRSF1-201ENST00000258962 TBXAS1P24557 533 aaPredicted RBP18.67■□□□□ 0.58
SRSF1-201ENST00000258962 RAB27AP51159 221 aa18.67■□□□□ 0.58
SRSF1-201ENST00000258962 ERVK-21P61565 698 aa18.67■□□□□ 0.58
SRSF1-201ENST00000258962 SGSM1Q2NKQ1 1148 aa18.67■□□□□ 0.58
SRSF1-201ENST00000258962 PAN2Q504Q3 1202 aaKnown RBP18.67■□□□□ 0.58
SRSF1-201ENST00000258962 CMTR2Q8IYT2 770 aaKnown RBP18.67■□□□□ 0.58
SRSF1-201ENST00000258962 ABI1Q8IZP0 508 aa18.67■□□□□ 0.58
SRSF1-201ENST00000258962 DDX1Q92499 740 aaKnown RBP18.67■□□□□ 0.58
SRSF1-201ENST00000258962 SAMD11Q96NU1 681 aa18.67■□□□□ 0.58
SRSF1-201ENST00000258962 TRAIPQ9BWF2 469 aa18.67■□□□□ 0.58
SRSF1-201ENST00000258962 IMPG2Q9BZV3 1241 aa18.67■□□□□ 0.58
SRSF1-201ENST00000258962 NXF3Q9H4D5 531 aaKnown RBP18.67■□□□□ 0.58
SRSF1-201ENST00000258962 STXBP5LQ9Y2K9 1186 aa18.67■□□□□ 0.58
SRSF1-201ENST00000258962 URI1O94763 535 aaPredicted RBP18.66■□□□□ 0.58
SRSF1-201ENST00000258962 MOCS3O95396 460 aa18.66■□□□□ 0.58
SRSF1-201ENST00000258962 FOSL2P15408 326 aa18.66■□□□□ 0.58
SRSF1-201ENST00000258962 CYP11B1P15538 503 aa18.66■□□□□ 0.58
SRSF1-201ENST00000258962 TRPC3Q13507 836 aa18.66■□□□□ 0.58
SRSF1-201ENST00000258962 TMEM132DQ14C87 1099 aa18.66■□□□□ 0.58
SRSF1-201ENST00000258962 SNX27Q96L92 541 aa18.66■□□□□ 0.58
SRSF1-201ENST00000258962 PCDHB18PQ96TA0 734 aa18.66■□□□□ 0.58
SRSF1-201ENST00000258962 FAM105AQ9NUU6 356 aa18.66■□□□□ 0.58
SRSF1-201ENST00000258962 TAS2R14Q9NYV8 317 aa18.66■□□□□ 0.58
SRSF1-201ENST00000258962 CNTN6Q9UQ52 1028 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms