RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 DNAJC12Q9UKB3 198 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 LRRC7Q96NW7 1537 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 SOWAHDA6NJG2 315 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 TCP11X1B4DZS4 312 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 BTN3A3O00478 584 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 PDE8AO60658 829 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 APOL3O95236 402 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 TLDC1Q6P9B6 456 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 NSUN7Q8NE18 718 aaKnown RBP7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 PRMT1Q99873 361 aaKnown RBP7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 UNKQ9C0B0 810 aaKnown RBP7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 ANKZF1Q9H8Y5 726 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 SNX8Q9Y5X2 465 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 A0A1B0GVG6 124 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 EYA2O00167 538 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 EVI2BP34910 448 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 STAT1P42224 750 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 TNFAIP2Q03169 654 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 LRRC63Q05C16 580 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 KLHL30Q0D2K2 578 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 ART3Q13508 389 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 CNGA2Q16280 664 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 ASIC2Q16515 512 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 TYW1BQ6NUM6 668 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 PLD3Q8IV08 490 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 FBXO30Q8TB52 745 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 SUCLG2Q96I99 432 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 ING2Q9H160 280 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 AGTPBP1Q9UPW5 1226 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 PSMA7O14818 248 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 PEX1O43933 1283 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 CCNKO75909 580 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 AGTP01019 485 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 TARSP26639 723 aaKnown RBP7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 MAPKAPK2P49137 400 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 RAPGEF1Q13905 1077 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 Q3ZCU0 254 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 STYK1Q6J9G0 422 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 ZNF804AQ7Z570 1209 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 ARL8AQ96BM9 186 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 TAMM41Q96BW9 452 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 MAELQ96JY0 434 aaKnown RBP7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 ZNF570Q96NI8 536 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 NUDT12Q9BQG2 462 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 ABCG8Q9H221 673 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 EHD3Q9NZN3 535 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 FER1L4A9Z1Z3 1794 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 C1orf167Q5SNV9 1468 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 OVOS2A0A0J9YW53 1432 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 TYW5A2RUC4 315 aaKnown RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 RAB19A4D1S5 217 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 VWA3AA6NCI4 1184 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 KPNA5O15131 536 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 USP12O75317 370 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 WDR47O94967 919 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 LYNP07948 512 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 CHMLP26374 656 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 GARSP41250 739 aaKnown RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 STARP49675 285 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 COPZ1P61923 177 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 TAGLNQ01995 201 aaKnown RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 HES5Q5TA89 166 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 OVOS2Q6IE36 1432 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 PMEPA1Q969W9 287 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 SERPINB12Q96P63 405 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 FMO2Q99518 471 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 HEPHQ9BQS7 1158 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 CINPQ9BW66 212 aaPredicted RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 NUSAP1Q9BXS6 441 aaKnown RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 ABCG4Q9H172 646 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 KCND1Q9NSA2 647 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 PTPN22Q9Y2R2 807 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 FPGT-TNNI3KV9GXZ4 949 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 NEURL1BA8MQ27 555 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 TRDMT1O14717 391 aaKnown RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 MFAP3LO75121 409 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 SNAP29O95721 258 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 GTF2H1P32780 548 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 NAMPTP43490 491 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 YWHAEP62258 255 aaKnown RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 UBXN2AP68543 259 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 ZNF846Q147U1 533 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 TYSND1Q2T9J0 566 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 C1orf94Q6P1W5 598 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 GPBP1Q86WP2 473 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 CARNMT1Q8N4J0 409 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 PSPC1Q8WXF1 523 aaKnown RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 LPIN3Q9BQK8 851 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 EHD4Q9H223 541 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 AFF4Q9UHB7 1163 aaKnown RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 NCOA3Q9Y6Q9 1424 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 GRID2IPA4D2P6 1211 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 A6NHS1 94 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 NFIBO00712 420 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 SYNCRIPO60506 623 aaKnown RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 OR7A10O76100 309 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 GYS1P13807 737 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 C21orf62-AS1Q17RA5 79 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 SWI5Q1ZZU3 235 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 TRAPPC3LQ5T215 181 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms