RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.97□□□□□ -0.49
PDE6B-201ENST00000255622 ATXN10Q9UBB4 475 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 GABBR1Q9UBS5 961 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 FZD1Q9UP38 647 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 FER1L6Q2WGJ9 1857 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 DOCK5Q9H7D0 1870 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 O00370 1275 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 TMCC1O94876 653 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 PAEPP09466 180 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 TCEAL1Q15170 157 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 CCSAPQ6IQ19 270 aaPredicted RBP11.97□□□□□ -0.49
PDE6B-201ENST00000255622 CPLX4Q7Z7G2 160 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 SPATS2Q86XZ4 545 aaKnown RBP11.97□□□□□ -0.49
PDE6B-201ENST00000255622 TMEM174Q8WUU8 243 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 CEP170P1Q96L14 293 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 NT5C1BQ96P26 610 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 CCDC113Q9H0I3 377 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 ANAPC7Q9UJX3 599 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 GTF3C4Q9UKN8 822 aa11.97□□□□□ -0.49
PDE6B-201ENST00000255622 HNRNPDLO14979 420 aaKnown RBP11.96□□□□□ -0.49
PDE6B-201ENST00000255622 WDR46O15213 610 aaKnown RBP11.96□□□□□ -0.49
PDE6B-201ENST00000255622 TP73O15350 636 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 RGS16O15492 202 aaPredicted RBP11.96□□□□□ -0.49
PDE6B-201ENST00000255622 MTA2O94776 668 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 CFHP08603 1231 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 GPC3P51654 580 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 DRG2P55039 364 aaKnown RBP11.96□□□□□ -0.49
PDE6B-201ENST00000255622 KLC1Q07866 573 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 UBE2Q1Q7Z7E8 422 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 FAM83AQ86UY5 434 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 TTLL6Q8N841 843 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 PSPC1Q8WXF1 523 aaKnown RBP11.96□□□□□ -0.49
PDE6B-201ENST00000255622 NACC2Q96BF6 587 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 XPO6Q96QU8 1125 aaKnown RBP11.96□□□□□ -0.49
PDE6B-201ENST00000255622 CHST7Q9NS84 486 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 NOP53Q9NZM5 478 aaKnown RBP11.96□□□□□ -0.49
PDE6B-201ENST00000255622 DNM1LO00429 736 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 RIPK2O43353 540 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 DRD4P21917 467 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 ARPC4P59998 168 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 CYP24A1Q07973 514 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 BAATQ14032 418 aaPredicted RBP11.96□□□□□ -0.49
PDE6B-201ENST00000255622 SEPT7Q16181 437 aaKnown RBP11.96□□□□□ -0.49
PDE6B-201ENST00000255622 ERMARDQ5T6L9 678 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 GKAP1Q5VSY0 366 aaPredicted RBP11.96□□□□□ -0.49
PDE6B-201ENST00000255622 SPOPLQ6IQ16 392 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 OTUD6AQ7L8S5 288 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 YTHDF3Q7Z739 585 aaKnown RBP11.96□□□□□ -0.49
PDE6B-201ENST00000255622 GBP7Q8N8V2 638 aaPredicted RBP11.96□□□□□ -0.49
PDE6B-201ENST00000255622 PWWP2AQ96N64 755 aa11.96□□□□□ -0.49
PDE6B-201ENST00000255622 RPAP3Q9H6T3 665 aaPredicted RBP11.96□□□□□ -0.49
PDE6B-201ENST00000255622 PODXLO00592 558 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 MAPK13O15264 365 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 HNRNPRO43390 633 aaKnown RBP11.96□□□□□ -0.5
PDE6B-201ENST00000255622 ACSL3O95573 720 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 IFNAR2P48551 515 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 OXCT1P55809 520 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 KRT72Q14CN4 511 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 TAF11Q15544 211 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 LONRF1Q17RB8 773 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 RNF220Q5VTB9 566 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 TMEM53Q6P2H8 277 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 NEK10Q6ZWH5 1172 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 SLC7A5P1Q8MH63 180 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 ATXN2LQ8WWM7 1075 aaKnown RBP11.96□□□□□ -0.5
PDE6B-201ENST00000255622 ZNF516Q92618 1163 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 PPP1R14BQ96C90 147 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 ATG4CQ96DT6 458 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 ABHD8Q96I13 439 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 CROTQ9UKG9 612 aa11.96□□□□□ -0.5
PDE6B-201ENST00000255622 A6NHS1 94 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 SRRM3A6NNA2 597 aaPredicted RBP11.95□□□□□ -0.5
PDE6B-201ENST00000255622 HSPA6P17066 643 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 RRM1P23921 792 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 PCK1P35558 622 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 CHKAP35790 457 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 VPS41P49754 854 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 KRT17Q04695 432 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 CXCL9Q07325 125 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 CYP1B1Q16678 543 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 ACAD10Q6JQN1 1059 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 TAS1R3Q7RTX0 852 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 PASD1Q8IV76 773 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 ART4Q93070 314 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 FGD4Q96M96 766 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 PRMT1Q99873 361 aaKnown RBP11.95□□□□□ -0.5
PDE6B-201ENST00000255622 PPP1R12CQ9BZL4 782 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 FAM129AQ9BZQ8 928 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 MTRF1LQ9UGC7 380 aaKnown RBP11.95□□□□□ -0.5
PDE6B-201ENST00000255622 MTUS1Q9ULD2 1270 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 EXOC7Q9UPT5 735 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 COQ4Q9Y3A0 265 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 MROH7Q68CQ1 1323 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 MAPK4P31152 587 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 MMP13P45452 471 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 JAK3P52333 1124 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 LRP8Q14114 963 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 CLUL1Q15846 466 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 CLEC16AQ2KHT3 1053 aa11.95□□□□□ -0.5
PDE6B-201ENST00000255622 SLC44A4Q53GD3 710 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms