RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 C3orf58Q8NDZ4 430 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 TOP1MTQ969P6 601 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 PDCL3Q9H2J4 239 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 KIAA1586Q9HCI6 787 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 NXF1Q9UBU9 619 aaKnown RBP12.98□□□□□ -0.33
NIP7-201ENST00000254940 CHORDC1Q9UHD1 332 aaPredicted RBP12.98□□□□□ -0.33
NIP7-201ENST00000254940 SIX4Q9UIU6 781 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 POLIQ9UNA4 740 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 GFPT2O94808 682 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 HLA-DRAP01903 254 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 THP07101 528 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 RAP1GAPP47736 663 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 KLHL30Q0D2K2 578 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 ORC1Q13415 861 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 PSRC1Q6PGN9 363 aaPredicted RBP12.98□□□□□ -0.33
NIP7-201ENST00000254940 GBP6Q6ZN66 633 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 HACE1Q8IYU2 909 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 TATDN2Q93075 761 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 MKNK1Q9BUB5 465 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 GOLPH3Q9H4A6 298 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 METTL14Q9HCE5 456 aaKnown RBP12.98□□□□□ -0.33
NIP7-201ENST00000254940 CNTN3Q9P232 1028 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 TIMM13Q9Y5L4 95 aaPredicted RBP12.98□□□□□ -0.33
NIP7-201ENST00000254940 RALGAPA2Q2PPJ7 1873 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 HCRTO43612 131 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 TNNC2P02585 160 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 SSTR3P32745 418 aaPredicted RBP12.97□□□□□ -0.33
NIP7-201ENST00000254940 DNA2P51530 1060 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 KRT83P78385 493 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 BTG3Q14201 252 aaPredicted RBP12.97□□□□□ -0.33
NIP7-201ENST00000254940 MYBPC2Q14324 1141 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 SPA17Q15506 151 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 DUOXA2Q1HG44 320 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 NPAS4Q8IUM7 802 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 CRIPAKQ8N1N5 446 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 OLIG1Q8TAK6 271 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 ANKRD7Q92527 254 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 CAPZA3Q96KX2 299 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 PPP1R10Q96QC0 940 aaKnown RBP12.97□□□□□ -0.33
NIP7-201ENST00000254940 HINFPQ9BQA5 517 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 INTS2Q9H0H0 1204 aaKnown RBP12.97□□□□□ -0.33
NIP7-201ENST00000254940 GIT1Q9Y2X7 761 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 CTAGE9A4FU28 777 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 DGKIO75912 1065 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 IL18RAPO95256 599 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 IPO7O95373 1038 aaKnown RBP12.97□□□□□ -0.33
NIP7-201ENST00000254940 C4BPAP04003 597 aaKnown RBP12.97□□□□□ -0.33
NIP7-201ENST00000254940 CXCR5P32302 372 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 BRCC3P46736 316 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 VAV2P52735 878 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 CDK17Q00537 523 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 MNS1Q8NEH6 495 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 ANKRD36BP1Q96IX9 119 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 FAM193BQ96PV7 902 aaPredicted RBP12.97□□□□□ -0.33
NIP7-201ENST00000254940 NRDE2Q9H7Z3 1164 aa12.97□□□□□ -0.33
NIP7-201ENST00000254940 MRPL42Q9Y6G3 142 aaKnown RBP12.97□□□□□ -0.33
NIP7-201ENST00000254940 COL4A6Q14031 1691 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 TMCO5BA8MYB1 307 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 KIAA0391O15091 583 aaKnown RBP12.96□□□□□ -0.33
NIP7-201ENST00000254940 SPTLC1O15269 473 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 NCK2O43639 380 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 TLL1O43897 1013 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 EOMESO95936 686 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 MAGEA1P43355 309 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 KIF5AQ12840 1032 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 TRPC3Q13507 836 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 NCOA4Q13772 614 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 NAB2Q15742 525 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 EPC2Q52LR7 807 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 FBXO38Q6PIJ6 1188 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 WDR49Q8IV35 697 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 HERC6Q8IVU3 1022 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 URGCPQ8TCY9 931 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 TMC2Q8TDI7 906 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 HERVK_113Q902F9 699 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 TRAIPQ9BWF2 469 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 SMARCAL1Q9NZC9 954 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 REV3LO60673 3130 aa12.96□□□□□ -0.33
NIP7-201ENST00000254940 EYSQ5T1H1 3165 aa12.96□□□□□ -0.34
NIP7-201ENST00000254940 FOXN3O00409 490 aaPredicted RBP12.96□□□□□ -0.34
NIP7-201ENST00000254940 KRT86O43790 486 aa12.96□□□□□ -0.34
NIP7-201ENST00000254940 SERPING1P05155 500 aa12.96□□□□□ -0.34
NIP7-201ENST00000254940 SKIP12755 728 aa12.96□□□□□ -0.34
NIP7-201ENST00000254940 MLLT1Q03111 559 aaPredicted RBP12.96□□□□□ -0.34
NIP7-201ENST00000254940 TEX35Q5T0J7 233 aa12.96□□□□□ -0.34
NIP7-201ENST00000254940 BCL7CQ8WUZ0 217 aaPredicted RBP12.96□□□□□ -0.34
NIP7-201ENST00000254940 NAPGQ99747 312 aaPredicted RBP12.96□□□□□ -0.34
NIP7-201ENST00000254940 APOBEC3GQ9HC16 384 aaKnown RBP12.96□□□□□ -0.34
NIP7-201ENST00000254940 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.34
NIP7-201ENST00000254940 AIPL1Q9NZN9 384 aa12.96□□□□□ -0.34
NIP7-201ENST00000254940 DNAJC12Q9UKB3 198 aa12.96□□□□□ -0.34
NIP7-201ENST00000254940 PACSIN2Q9UNF0 486 aaPredicted RBP12.96□□□□□ -0.34
NIP7-201ENST00000254940 TADA3O75528 432 aa12.95□□□□□ -0.34
NIP7-201ENST00000254940 B3GAT3O94766 335 aa12.95□□□□□ -0.34
NIP7-201ENST00000254940 KIF4AO95239 1232 aa12.95□□□□□ -0.34
NIP7-201ENST00000254940 GJB5O95377 273 aa12.95□□□□□ -0.34
NIP7-201ENST00000254940 PFKMP08237 780 aa12.95□□□□□ -0.34
NIP7-201ENST00000254940 CD58P19256 250 aa12.95□□□□□ -0.34
NIP7-201ENST00000254940 SLC11A1P49279 550 aa12.95□□□□□ -0.34
NIP7-201ENST00000254940 CDH8P55286 799 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms