RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ORC1Q13415 861 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 C2CD6Q53TS8 623 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 BEND6Q5SZJ8 279 aaPredicted RBP20.16■□□□□ 0.82
TRIM47-201ENST00000254816 NAA35Q5VZE5 725 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 LHX8Q68G74 356 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 ALKAL1Q6UXT8 129 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 DAAM2Q86T65 1068 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 EHD2Q9NZN4 543 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 CTTNBP2NLQ9P2B4 639 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 PDE2AO00408 941 aaPredicted RBP20.16■□□□□ 0.82
TRIM47-201ENST00000254816 BUB1BO60566 1050 aaPredicted RBP20.16■□□□□ 0.82
TRIM47-201ENST00000254816 BRD2P25440 801 aaKnown RBP20.16■□□□□ 0.82
TRIM47-201ENST00000254816 GRK4P32298 578 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 PHLDB2Q86SQ0 1253 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 NT5DC4Q86YG4 428 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 ARRDC4Q8NCT1 418 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 ZNF606Q8WXB4 792 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 ZNF653Q96CK0 615 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 ZSWIM1Q9BR11 485 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 BCO2Q9BYV7 579 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 HMX1Q9NP08 348 aaPredicted RBP20.16■□□□□ 0.82
TRIM47-201ENST00000254816 SMARCAL1Q9NZC9 954 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 TRIM17Q9Y577 477 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 OAS2P29728 719 aaKnown RBP20.15■□□□□ 0.82
TRIM47-201ENST00000254816 RBP5P82980 135 aa20.15■□□□□ 0.82
TRIM47-201ENST00000254816 SMC1AQ14683 1233 aaKnown RBP20.15■□□□□ 0.82
TRIM47-201ENST00000254816 SLAIN1Q8ND83 568 aa20.15■□□□□ 0.82
TRIM47-201ENST00000254816 UBXN6Q9BZV1 441 aa20.15■□□□□ 0.82
TRIM47-201ENST00000254816 CNTN3Q9P232 1028 aa20.15■□□□□ 0.82
TRIM47-201ENST00000254816 CYP1A1P04798 512 aaPredicted RBP20.15■□□□□ 0.82
TRIM47-201ENST00000254816 ATICP31939 592 aa20.15■□□□□ 0.82
TRIM47-201ENST00000254816 ZBTB6Q15916 424 aa20.15■□□□□ 0.82
TRIM47-201ENST00000254816 CREG2Q8IUH2 290 aa20.15■□□□□ 0.82
TRIM47-201ENST00000254816 CAGE1Q8TC20 777 aa20.15■□□□□ 0.82
TRIM47-201ENST00000254816 SH3TC2Q8TF17 1288 aa20.15■□□□□ 0.82
TRIM47-201ENST00000254816 HNRNPLLQ8WVV9 542 aaKnown RBP20.15■□□□□ 0.82
TRIM47-201ENST00000254816 AGO3Q9H9G7 860 aaKnown RBP20.15■□□□□ 0.82
TRIM47-201ENST00000254816 HMGXB4Q9UGU5 601 aa20.15■□□□□ 0.82
TRIM47-201ENST00000254816 MYCP01106 439 aaPredicted RBP20.14■□□□□ 0.81
TRIM47-201ENST00000254816 TUBB4BP68371 445 aa20.14■□□□□ 0.81
TRIM47-201ENST00000254816 LLGL2Q6P1M3 1020 aa20.14■□□□□ 0.81
TRIM47-201ENST00000254816 SLFN11Q7Z7L1 901 aa20.14■□□□□ 0.81
TRIM47-201ENST00000254816 TFAP2BQ92481 460 aa20.14■□□□□ 0.81
TRIM47-201ENST00000254816 NOD1Q9Y239 953 aa20.14■□□□□ 0.81
TRIM47-201ENST00000254816 PRLRP16471 622 aa20.14■□□□□ 0.81
TRIM47-201ENST00000254816 PEX26Q7Z412 305 aa20.14■□□□□ 0.81
TRIM47-201ENST00000254816 RHOT2Q8IXI1 618 aa20.14■□□□□ 0.81
TRIM47-201ENST00000254816 MS4A14Q96JA4 679 aa20.14■□□□□ 0.81
TRIM47-201ENST00000254816 TWNKQ96RR1 684 aa20.14■□□□□ 0.81
TRIM47-201ENST00000254816 DERAQ9Y315 318 aa20.14■□□□□ 0.81
TRIM47-201ENST00000254816 SMIM28A0A1B0GU29 152 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 MEIS3P2A8K0S8 358 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 ERLIN1O75477 346 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 TCP1P17987 556 aaKnown RBP20.13■□□□□ 0.81
TRIM47-201ENST00000254816 BTBD6Q96KE9 485 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 GLT1D1Q96MS3 346 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 NUP85Q9BW27 656 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 VRTNQ9H8Y1 702 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 CNOT8Q9UFF9 292 aaKnown RBP20.13■□□□□ 0.81
TRIM47-201ENST00000254816 TMEM110-MUSTN1A8MSY1 372 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 MAP2K7O14733 419 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 KIF4AO95239 1232 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 GHRP10912 638 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 NOMO3P69849 1222 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 CENPCQ03188 943 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 RPS6KA1Q15418 735 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 RPAINQ86UA6 219 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 NT5DC3Q86UY8 548 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 MCOLN2Q8IZK6 566 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 BEST2Q8NFU1 509 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 WHAMMQ8TF30 809 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 GOLGA2P5Q9HBQ8 144 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 SAGE1Q9NXZ1 904 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 STXBP5LQ9Y2K9 1186 aa20.13■□□□□ 0.81
TRIM47-201ENST00000254816 CYP1A2P05177 515 aa20.12■□□□□ 0.81
TRIM47-201ENST00000254816 CD52P31358 61 aa20.12■□□□□ 0.81
TRIM47-201ENST00000254816 NSFP46459 744 aaKnown RBP20.12■□□□□ 0.81
TRIM47-201ENST00000254816 YWHAEP62258 255 aaKnown RBP20.12■□□□□ 0.81
TRIM47-201ENST00000254816 GTF3C4Q9UKN8 822 aa20.12■□□□□ 0.81
TRIM47-201ENST00000254816 H3BQF6 201 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 CABYRO75952 493 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 CD19P15391 556 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 IBSPP21815 317 aaPredicted RBP20.11■□□□□ 0.81
TRIM47-201ENST00000254816 RAD23BP54727 409 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 TNNC1P63316 161 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 CKAP4Q07065 602 aaKnown RBP20.11■□□□□ 0.81
TRIM47-201ENST00000254816 C2orf54Q08AI8 447 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 ARHGEF6Q15052 776 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 SYCE1Q8N0S2 351 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 ZFP42Q96MM3 310 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 C11orf70Q9BRQ4 267 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 ELOVL4Q9GZR5 314 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 TRPV6Q9H1D0 765 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 L1RE1Q9UN81 338 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 A0A1W2PQ45 241 aaPredicted RBP20.11■□□□□ 0.81
TRIM47-201ENST00000254816 A0A1W2PQY0 241 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 RRM1P23921 792 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 SOX4Q06945 474 aaPredicted RBP20.11■□□□□ 0.81
TRIM47-201ENST00000254816 PTK7Q13308 1070 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 FBXO47Q5MNV8 452 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms