RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 GRIN1Q05586 938 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 ACAD10Q6JQN1 1059 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 JAMLQ86YT9 394 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 SEPT5Q99719 369 aaPredicted RBP19.88■□□□□ 0.77
PTPRE-201ENST00000254667 TRIM51Q9BSJ1 452 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 LRRC14Q15048 493 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 CCNI2Q6ZMN8 369 aaPredicted RBP19.88■□□□□ 0.77
PTPRE-201ENST00000254667 SLC7A14Q8TBB6 771 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 MRGBPQ9NV56 204 aa19.88■□□□□ 0.77
PTPRE-201ENST00000254667 ODC1P11926 461 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 HNRNPH2P55795 449 aaKnown RBP19.87■□□□□ 0.77
PTPRE-201ENST00000254667 SGSM3Q96HU1 749 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 SLITRK1Q96PX8 696 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 FRMD8P1Q9BZ68 369 aaPredicted RBP19.87■□□□□ 0.77
PTPRE-201ENST00000254667 ROPN1BQ9BZX4 212 aaPredicted RBP19.87■□□□□ 0.77
PTPRE-201ENST00000254667 RIOX1Q9H6W3 641 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 ROPN1Q9HAT0 212 aaPredicted RBP19.87■□□□□ 0.77
PTPRE-201ENST00000254667 MED24O75448 989 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 GFAPP14136 432 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 LCA5Q86VQ0 697 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 DDIASQ8IXT1 998 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 TRIML2Q8N7C3 387 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 VPS33BQ9H267 617 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 SMYD3Q9H7B4 428 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 OR1G1P47890 313 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 GTF2H3Q13889 308 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 SZRD1Q7Z422 152 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 SPATA18Q8TC71 538 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 AGAP3Q96P47 875 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 EPC1Q9H2F5 836 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 DPP3Q9NY33 737 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 PLAGL2Q9UPG8 496 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 MORC2Q9Y6X9 1032 aaPredicted RBP19.87■□□□□ 0.77
PTPRE-201ENST00000254667 GPR182O15218 404 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 ITGB3P05106 788 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 HIST1H2AGP0C0S8 130 aaPredicted RBP19.87■□□□□ 0.77
PTPRE-201ENST00000254667 KCNA2P16389 499 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 HIST1H2ADP20671 130 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 ZNF200P98182 395 aaPredicted RBP19.87■□□□□ 0.77
PTPRE-201ENST00000254667 HIST1H2AHQ96KK5 128 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 HIST1H2AJQ99878 128 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 H2AFJQ9BTM1 129 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 KDM4CQ9H3R0 1056 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 KBTBD4Q9NVX7 518 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 ARHGEF38Q9NXL2 777 aa19.87■□□□□ 0.77
PTPRE-201ENST00000254667 AP2B1P63010 937 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 THEMIS2Q5TEJ8 643 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 PTPRN2Q92932 1015 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 CARD9Q9H257 536 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 SLC2A3P11169 496 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 MYBPC2Q14324 1141 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 MGAT5BQ3V5L5 792 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 DCAF6Q58WW2 860 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 USP38Q8NB14 1042 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 PABPC5Q96DU9 382 aaKnown RBP19.86■□□□□ 0.77
PTPRE-201ENST00000254667 PCDHGB4Q9UN71 923 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 SLC30A1Q9Y6M5 507 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 STAG3L1P0CL83 205 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 PDAP1Q13442 181 aaKnown RBP19.86■□□□□ 0.77
PTPRE-201ENST00000254667 AGBL2Q5U5Z8 902 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 MPZL3Q6UWV2 235 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 RIBC1Q8N443 379 aaPredicted RBP19.86■□□□□ 0.77
PTPRE-201ENST00000254667 TBC1D19Q8N5T2 526 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 ADA2Q9NZK5 511 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 AFF4Q9UHB7 1163 aaKnown RBP19.86■□□□□ 0.77
PTPRE-201ENST00000254667 PCDHB7Q9Y5E2 793 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 SPRP35270 261 aaPredicted RBP19.86■□□□□ 0.77
PTPRE-201ENST00000254667 ABCE1P61221 599 aaKnown RBP19.86■□□□□ 0.77
PTPRE-201ENST00000254667 IL31Q6EBC2 164 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 TXNRD3Q86VQ6 643 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 LBHD1Q9BQE6 289 aaPredicted RBP19.86■□□□□ 0.77
PTPRE-201ENST00000254667 HPSEQ9Y251 543 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 MST1RQ04912 1400 aa19.86■□□□□ 0.77
PTPRE-201ENST00000254667 CST8O60676 142 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 FIGNQ5HY92 759 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 RBM12Q9NTZ6 932 aaKnown RBP19.85■□□□□ 0.77
PTPRE-201ENST00000254667 TLR2O60603 784 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 C4orf19Q8IY42 314 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 MMGT1Q8N4V1 131 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 TMC2Q8TDI7 906 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 SLC26A7Q8TE54 656 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 PI4K2AQ9BTU6 479 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 COLEC11Q9BWP8 271 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 SH3BP1Q9Y3L3 701 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 RIMS1Q86UR5 1692 aaKnown RBP19.85■□□□□ 0.77
PTPRE-201ENST00000254667 FAM205AQ6ZU69 1335 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 TNS2Q63HR2 1409 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 PSTPIP1O43586 416 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 NDUFS3O75489 264 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 SPATA21Q7Z572 469 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 FBXL16Q8N461 479 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 DNERQ8NFT8 737 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 MYCBPQ99417 103 aaPredicted RBP19.85■□□□□ 0.77
PTPRE-201ENST00000254667 ETNK1Q9HBU6 452 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 PPP1R37O75864 691 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 RBP3P10745 1247 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 BRD2P25440 801 aaKnown RBP19.85■□□□□ 0.77
PTPRE-201ENST00000254667 KLRC1P26715 233 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 ZBTB41Q5SVQ8 909 aa19.85■□□□□ 0.77
PTPRE-201ENST00000254667 TRIM65Q6PJ69 517 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms