RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 WDTC1Q8N5D0 677 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 SGSM3Q96HU1 749 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 SERPINB12Q96P63 405 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 ROPN1BQ9BZX4 212 aaPredicted RBP10.72□□□□□ -0.69
COPB1-201ENST00000249923 DHX33Q9H6R0 707 aaKnown RBP10.72□□□□□ -0.69
COPB1-201ENST00000249923 KIF9Q9HAQ2 790 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 ROPN1Q9HAT0 212 aaPredicted RBP10.72□□□□□ -0.69
COPB1-201ENST00000249923 TJP2Q9UDY2 1190 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 HACL1Q9UJ83 578 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 DNPEPQ9ULA0 475 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 ANK1P16157 1881 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 A0A0B4J269 797 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 NFKBIEO00221 500 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 DIAPH2O60879 1101 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 GNA15P30679 374 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 FOXN2P32314 431 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 SARNPP82979 210 aaKnown RBP10.72□□□□□ -0.69
COPB1-201ENST00000249923 CNTN2Q02246 1040 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 GALNTL6Q49A17 601 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 ENOSF1Q7L5Y1 443 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 KATNAL2Q8IYT4 538 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 ATP6V0A1Q93050 837 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 OSBPL8Q9BZF1 889 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 TRIM6Q9C030 488 aaPredicted RBP10.72□□□□□ -0.69
COPB1-201ENST00000249923 ANKFY1Q9P2R3 1169 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 NAALADL1Q9UQQ1 740 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 MAFBQ9Y5Q3 323 aaPredicted RBP10.72□□□□□ -0.69
COPB1-201ENST00000249923 NFASCO94856 1347 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 F8VP50 259 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 ZBED4O75132 1171 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 BANF1O75531 89 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 TCEA3O75764 348 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 UBOX5O94941 541 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 FGFR1P11362 822 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 ARL2P36404 184 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 SLC1A1P43005 524 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 LIG4P49917 911 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 MTM1Q13496 603 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 PHF13Q86YI8 300 aaPredicted RBP10.72□□□□□ -0.69
COPB1-201ENST00000249923 CCDC50Q8IVM0 306 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 RBBP8NLQ8NC74 664 aaPredicted RBP10.72□□□□□ -0.69
COPB1-201ENST00000249923 MCPH1Q8NEM0 835 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 ATL2Q8NHH9 583 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 SPOCK2Q92563 424 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 PRCCQ92733 491 aaPredicted RBP10.72□□□□□ -0.69
COPB1-201ENST00000249923 RUNDC3BQ96NL0 473 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 WDR83Q9BRX9 315 aaKnown RBP10.72□□□□□ -0.69
COPB1-201ENST00000249923 TRAIPQ9BWF2 469 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 PORCNQ9H237 461 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 YY1AP1Q9H869 796 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 RBAKQ9NYW8 714 aaPredicted RBP10.72□□□□□ -0.69
COPB1-201ENST00000249923 ADAM22Q9P0K1 906 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 TCEAL9Q9UHQ7 104 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 PNMA3Q9UL41 463 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 USTQ9Y2C2 406 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 PAPPA2Q9BXP8 1791 aa10.72□□□□□ -0.69
COPB1-201ENST00000249923 PIGRP01833 764 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 PSAPP07602 524 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 SUPT20HL2P0C7V6 817 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 ADCY8P40145 1251 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 WDR4P57081 412 aaKnown RBP10.71□□□□□ -0.69
COPB1-201ENST00000249923 KCNJ2P63252 427 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 NOP14P78316 857 aaKnown RBP10.71□□□□□ -0.69
COPB1-201ENST00000249923 ENPEPQ07075 957 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 GNPTABQ3T906 1256 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 SUPT20HL1Q3ZLR7 823 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 MFSD7Q6UXD7 560 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.71□□□□□ -0.69
COPB1-201ENST00000249923 TRPM8Q7Z2W7 1104 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 ZNF677Q86XU0 584 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 NSMCE1Q8WV22 266 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 MAML1Q92585 1016 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 KLHL29Q96CT2 875 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 PRKAG3Q9UGI9 489 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 LGALS13Q9UHV8 139 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 IVNS1ABPQ9Y6Y0 642 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 TLR3O15455 904 aaKnown RBP10.71□□□□□ -0.69
COPB1-201ENST00000249923 PSTPIP1O43586 416 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 PIAS1O75925 651 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 ATG7O95352 703 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 ATF2P15336 505 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 MMP8P22894 467 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 YY1P25490 414 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 CCNG2Q16589 344 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 P3H1Q32P28 736 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 IZUMO3Q5VZ72 239 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 NUGGCQ68CJ6 796 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 CIAPIN1Q6FI81 312 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 DLK2Q6UY11 383 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 FITM2Q8N6M3 262 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 ARFGAP1Q8N6T3 406 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 NSUN6Q8TEA1 469 aaKnown RBP10.71□□□□□ -0.69
COPB1-201ENST00000249923 SLITRK1Q96PX8 696 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 C10orf88Q9H8K7 445 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 ANAPC5Q9UJX4 755 aa10.71□□□□□ -0.69
COPB1-201ENST00000249923 THAP12O43422 761 aa10.71□□□□□ -0.7
COPB1-201ENST00000249923 LIASO43766 372 aa10.71□□□□□ -0.7
COPB1-201ENST00000249923 HMGB2P26583 209 aaKnown RBP10.71□□□□□ -0.7
COPB1-201ENST00000249923 NCALDP61601 193 aa10.71□□□□□ -0.7
COPB1-201ENST00000249923 CAPSQ13938 189 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms