RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 THG1LQ9NWX6 298 aaKnown RBP13.14□□□□□ -0.31
RFPL3-201ENST00000249007 EVLQ9UI08 416 aaPredicted RBP13.14□□□□□ -0.31
RFPL3-201ENST00000249007 YIPF1Q9Y548 306 aa13.14□□□□□ -0.31
RFPL3-201ENST00000249007 NUP210Q8TEM1 1887 aaPredicted RBP13.14□□□□□ -0.31
RFPL3-201ENST00000249007 PRAMEF12O95522 483 aa13.13□□□□□ -0.31
RFPL3-201ENST00000249007 DHPSP49366 369 aaPredicted RBP13.13□□□□□ -0.31
RFPL3-201ENST00000249007 MCM2P49736 904 aa13.13□□□□□ -0.31
RFPL3-201ENST00000249007 SEMA3BQ13214 749 aa13.13□□□□□ -0.31
RFPL3-201ENST00000249007 PRPF4BQ13523 1007 aaKnown RBP13.13□□□□□ -0.31
RFPL3-201ENST00000249007 MRPL58Q14197 206 aaKnown RBP13.13□□□□□ -0.31
RFPL3-201ENST00000249007 DMC1Q14565 340 aa13.13□□□□□ -0.31
RFPL3-201ENST00000249007 FAM187BQ17R55 369 aa13.13□□□□□ -0.31
RFPL3-201ENST00000249007 ZNF423Q2M1K9 1284 aa13.13□□□□□ -0.31
RFPL3-201ENST00000249007 PPP4R3AQ6IN85 833 aa13.13□□□□□ -0.31
RFPL3-201ENST00000249007 ZNF280DQ6N043 979 aa13.13□□□□□ -0.31
RFPL3-201ENST00000249007 RAB44Q7Z6P3 723 aaPredicted RBP13.13□□□□□ -0.31
RFPL3-201ENST00000249007 TPH2Q8IWU9 490 aa13.13□□□□□ -0.31
RFPL3-201ENST00000249007 RPLP0P6Q8NHW5 317 aa13.13□□□□□ -0.31
RFPL3-201ENST00000249007 FZD8Q9H461 694 aa13.13□□□□□ -0.31
RFPL3-201ENST00000249007 UPK3BL1B0FP48 263 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 UPK3BL2E5RIL1 263 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 EPHB3P54753 998 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 PLD1Q13393 1074 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 FBXO43Q4G163 708 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 GPR158Q5T848 1215 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 RNF20Q5VTR2 975 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 NCAPH2Q6IBW4 605 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 RNF19BQ6ZMZ0 732 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 GAREM2Q75VX8 874 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 ZBTB8OSQ8IWT0 167 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 ACDQ96AP0 544 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 CHFRQ96EP1 664 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 SLC26A6Q9BXS9 759 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 RNF26Q9BY78 433 aaPredicted RBP13.12□□□□□ -0.31
RFPL3-201ENST00000249007 ATXN3LQ9H3M9 355 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 SCUBE2Q9NQ36 999 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 SH3GLB2Q9NR46 395 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 GKN1Q9NS71 199 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 PCDHA4Q9UN74 947 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 RAXQ9Y2V3 346 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 NUB1Q9Y5A7 615 aa13.12□□□□□ -0.31
RFPL3-201ENST00000249007 CYSRT1A8MQ03 144 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 PODXLO00592 558 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 ENGP17813 658 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 DRD1P21728 446 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 BCKDHBP21953 392 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 FAM193AP78312 1265 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 AMPD2Q01433 879 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 SOX4Q06945 474 aaPredicted RBP13.11□□□□□ -0.31
RFPL3-201ENST00000249007 MAPK6Q16659 721 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 INF2Q27J81 1249 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 DCAF4L1Q3SXM0 396 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 ARHGAP15Q53QZ3 475 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 TAF3Q5VWG9 929 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 CDCA2Q69YH5 1023 aaPredicted RBP13.11□□□□□ -0.31
RFPL3-201ENST00000249007 TSTD1Q8NFU3 115 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 TPSD1Q9BZJ3 242 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 DNAJC25Q9H1X3 360 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 FBRSL1Q9HCM7 1045 aaKnown RBP13.11□□□□□ -0.31
RFPL3-201ENST00000249007 USP20Q9Y2K6 914 aa13.11□□□□□ -0.31
RFPL3-201ENST00000249007 GOLGA4Q13439 2230 aaKnown RBP13.11□□□□□ -0.31
RFPL3-201ENST00000249007 SMIM28A0A1B0GU29 152 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 OTOL1A6NHN0 477 aaPredicted RBP13.1□□□□□ -0.31
RFPL3-201ENST00000249007 MARCH6O60337 910 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 SLITRK3O94933 977 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 PRB1P04280 392 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 RUNX3Q13761 415 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 EEF1DP3Q658K8 133 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 HDDC3Q8N4P3 179 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 MDM1Q8TC05 714 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 IPO4Q8TEX9 1081 aaKnown RBP13.1□□□□□ -0.31
RFPL3-201ENST00000249007 FAM83CQ9BQN1 747 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 EBF3Q9H4W6 596 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 GPRC5CQ9NQ84 441 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 ANO2Q9NQ90 1003 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 HPS4Q9NQG7 708 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 ANKEF1Q9NU02 776 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 SLC38A7Q9NVC3 462 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 USO1O60763 962 aaKnown RBP13.1□□□□□ -0.31
RFPL3-201ENST00000249007 FGF19O95750 216 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 LIG1P18858 919 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 GABRR2P28476 465 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 ALDH1A3P47895 512 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 RARRES1P49788 294 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 ATXN3P54252 364 aaPredicted RBP13.1□□□□□ -0.31
RFPL3-201ENST00000249007 MAEAQ7L5Y9 396 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 BLIDQ8IZY5 108 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 APPL2Q8NEU8 664 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 BEST2Q8NFU1 509 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 HAS1Q92839 578 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 PGLYRP2Q96PD5 576 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 P2RY13Q9BPV8 354 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 POLR3CQ9BUI4 534 aaPredicted RBP13.1□□□□□ -0.31
RFPL3-201ENST00000249007 SMG9Q9H0W8 520 aaKnown RBP13.1□□□□□ -0.31
RFPL3-201ENST00000249007 C2orf40Q9H1Z8 148 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 TASP1Q9H6P5 420 aa13.1□□□□□ -0.31
RFPL3-201ENST00000249007 NID2Q14112 1375 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 M0R2N6 131 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 ACKR2O00590 384 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 LYPLA2O95372 231 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms