RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ZNF148Q9UQR1 794 aa27.08■■□□□ 1.93
RAB40C-201ENST00000248139 STYXL1Q9Y6J8 313 aa27.08■■□□□ 1.93
RAB40C-201ENST00000248139 NFASCO94856 1347 aa27.07■■□□□ 1.92
RAB40C-201ENST00000248139 A0A0B4J269 797 aa27.07■■□□□ 1.92
RAB40C-201ENST00000248139 MARK3P27448 753 aa27.07■■□□□ 1.92
RAB40C-201ENST00000248139 CAPSQ13938 189 aa27.07■■□□□ 1.92
RAB40C-201ENST00000248139 ANGEL2Q5VTE6 544 aaKnown RBP27.07■■□□□ 1.92
RAB40C-201ENST00000248139 PARP9Q8IXQ6 854 aa27.07■■□□□ 1.92
RAB40C-201ENST00000248139 MAIP1Q8WWC4 291 aa27.07■■□□□ 1.92
RAB40C-201ENST00000248139 CCDC134Q9H6E4 229 aa27.07■■□□□ 1.92
RAB40C-201ENST00000248139 MRPL47Q9HD33 250 aaKnown RBP27.07■■□□□ 1.92
RAB40C-201ENST00000248139 TPX2Q9ULW0 747 aaKnown RBP27.07■■□□□ 1.92
RAB40C-201ENST00000248139 RLFQ13129 1914 aa27.07■■□□□ 1.92
RAB40C-201ENST00000248139 PSTPIP1O43586 416 aa27.07■■□□□ 1.92
RAB40C-201ENST00000248139 MYL6P60660 151 aa27.07■■□□□ 1.92
RAB40C-201ENST00000248139 OSTNP61366 133 aa27.07■■□□□ 1.92
RAB40C-201ENST00000248139 TMEM63BQ5T3F8 832 aa27.07■■□□□ 1.92
RAB40C-201ENST00000248139 TBC1D1Q86TI0 1168 aaPredicted RBP27.07■■□□□ 1.92
RAB40C-201ENST00000248139 KATNAL2Q8IYT4 538 aa27.07■■□□□ 1.92
RAB40C-201ENST00000248139 SPAG7O75391 227 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 BANF1O75531 89 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 ARL2P36404 184 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 TMED2Q15363 201 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 ZBTB10Q96DT7 871 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 SAYSD1Q9NPB0 183 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 MAFBQ9Y5Q3 323 aaPredicted RBP27.06■■□□□ 1.92
RAB40C-201ENST00000248139 PARP14Q460N5 1801 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 UBOX5O94941 541 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 KRT1P04264 644 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 SRGAP2CP0DJJ0 459 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 KLRC2P26717 231 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 ANKRD35Q8N283 1001 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 PCYT2Q99447 389 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 CGRRF1Q99675 332 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 KIF9Q9HAQ2 790 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 TJP2Q9UDY2 1190 aa27.06■■□□□ 1.92
RAB40C-201ENST00000248139 SPDYE16A6NNV3 312 aaPredicted RBP27.05■■□□□ 1.92
RAB40C-201ENST00000248139 GOLGA8SH3BPF8 625 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 GOLGA8MH3BSY2 632 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 NAMPTP43490 491 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 PHF13Q86YI8 300 aaPredicted RBP27.05■■□□□ 1.92
RAB40C-201ENST00000248139 CCDC89Q8N998 374 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 TCP11Q8WWU5 503 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 SGSM3Q96HU1 749 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 R3HDMLQ9H3Y0 253 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 ZBTB7AO95365 584 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 MAN1A1P33908 653 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 MAGEA4P43358 317 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 ORC1Q13415 861 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 CATSPERGQ6ZRH7 1159 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 CEP57Q86XR8 500 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 EXD1Q8NHP7 514 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 CDHR1Q96JP9 859 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 PARVAQ9NVD7 372 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 ADAMTS5Q9UNA0 930 aa27.05■■□□□ 1.92
RAB40C-201ENST00000248139 POC1B-GALNT4F8VUJ3 575 aa27.04■■□□□ 1.92
RAB40C-201ENST00000248139 DYNLT1P63172 113 aa27.04■■□□□ 1.92
RAB40C-201ENST00000248139 ITIH4Q14624 930 aa27.04■■□□□ 1.92
RAB40C-201ENST00000248139 STXBP2Q15833 593 aa27.04■■□□□ 1.92
RAB40C-201ENST00000248139 SYDE1Q6ZW31 735 aaPredicted RBP27.04■■□□□ 1.92
RAB40C-201ENST00000248139 AS3MTQ9HBK9 375 aa27.04■■□□□ 1.92
RAB40C-201ENST00000248139 IFNB1P01574 187 aa27.04■■□□□ 1.92
RAB40C-201ENST00000248139 POTEJP0CG39 1038 aa27.04■■□□□ 1.92
RAB40C-201ENST00000248139 ARSEP51690 589 aa27.04■■□□□ 1.92
RAB40C-201ENST00000248139 XRCC4Q13426 336 aa27.04■■□□□ 1.92
RAB40C-201ENST00000248139 E2F5Q15329 346 aa27.04■■□□□ 1.92
RAB40C-201ENST00000248139 FAM47EQ6ZV65 393 aa27.04■■□□□ 1.92
RAB40C-201ENST00000248139 TRIM50Q86XT4 487 aa27.04■■□□□ 1.92
RAB40C-201ENST00000248139 PRPF31Q8WWY3 499 aaKnown RBP27.04■■□□□ 1.92
RAB40C-201ENST00000248139 SLITRK1Q96PX8 696 aa27.04■■□□□ 1.92
RAB40C-201ENST00000248139 ADGRA2Q96PE1 1338 aa27.04■■□□□ 1.92
RAB40C-201ENST00000248139 ITGBL1O95965 494 aaPredicted RBP27.03■■□□□ 1.92
RAB40C-201ENST00000248139 GJB1P08034 283 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 MMP8P22894 467 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 TGFB2P61812 414 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 GPS1Q13098 491 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 SMTNL2Q2TAL5 461 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 DCUN1D2Q6PH85 259 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 LRRC71Q8N4P6 559 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 TFAP2BQ92481 460 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 TMEM121Q9BTD3 319 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 PNMA3Q9UL41 463 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 H0YCG3 227 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 LIASO43766 372 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 STX2P32856 288 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 PLCB3Q01970 1234 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 PNMA8AQ86V59 439 aaPredicted RBP27.03■■□□□ 1.92
RAB40C-201ENST00000248139 TGS1Q96RS0 853 aaKnown RBP27.03■■□□□ 1.92
RAB40C-201ENST00000248139 NSRP1Q9H0G5 558 aaKnown RBP27.03■■□□□ 1.92
RAB40C-201ENST00000248139 TMEM191CA6NGB0 347 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 TMEM191BP0C7N4 346 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 GHRP10912 638 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 UBA1P22314 1058 aaKnown RBP27.03■■□□□ 1.92
RAB40C-201ENST00000248139 HIRAP54198 1017 aaPredicted RBP27.03■■□□□ 1.92
RAB40C-201ENST00000248139 GAD2Q05329 585 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 DALRD3Q5D0E6 543 aaKnown RBP27.03■■□□□ 1.92
RAB40C-201ENST00000248139 KCNT1Q5JUK3 1230 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 SLFN12LQ6IEE8 588 aa27.03■■□□□ 1.92
RAB40C-201ENST00000248139 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.03■■□□□ 1.927e-7■■■□□ 16.7
RAB40C-201ENST00000248139 SLC12A4Q9UP95 1085 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms