RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 MSTO1Q9BUK6 570 aa13.53□□□□□ -0.24
SNAI1-201ENST00000244050 TARS2Q9BW92 718 aaKnown RBP13.53□□□□□ -0.24
SNAI1-201ENST00000244050 PLVAPQ9BX97 442 aa13.53□□□□□ -0.24
SNAI1-201ENST00000244050 FAM129AQ9BZQ8 928 aa13.53□□□□□ -0.24
SNAI1-201ENST00000244050 RBAKQ9NYW8 714 aaPredicted RBP13.53□□□□□ -0.24
SNAI1-201ENST00000244050 PARP2Q9UGN5 583 aa13.53□□□□□ -0.24
SNAI1-201ENST00000244050 CNTNAP2Q9UHC6 1331 aa13.52□□□□□ -0.24
SNAI1-201ENST00000244050 SRRM3A6NNA2 597 aaPredicted RBP13.52□□□□□ -0.25
SNAI1-201ENST00000244050 H3BRB1 525 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 TNPO2O14787 897 aaKnown RBP13.52□□□□□ -0.25
SNAI1-201ENST00000244050 FSCN2O14926 492 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 HOXC6P09630 235 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 CYP2B6P20813 491 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 TBXAS1P24557 533 aaPredicted RBP13.52□□□□□ -0.25
SNAI1-201ENST00000244050 COILP38432 576 aaPredicted RBP13.52□□□□□ -0.25
SNAI1-201ENST00000244050 CLCN3P51790 818 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 AP3M2P53677 418 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 EIF3BP55884 814 aaKnown RBP13.52□□□□□ -0.25
SNAI1-201ENST00000244050 FCGRTP55899 365 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 CUL2Q13617 745 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 TFDP1Q14186 410 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 DGKDQ16760 1214 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 PRAMEF19Q5SWL8 479 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 LMBRD2Q68DH5 695 aaPredicted RBP13.52□□□□□ -0.25
SNAI1-201ENST00000244050 PPP1R2P3Q6NXS1 205 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 CCDC137Q6PK04 289 aaKnown RBP13.52□□□□□ -0.25
SNAI1-201ENST00000244050 ZDHHC24Q6UX98 284 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 ARFGAP2Q8N6H7 521 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 SOCS4Q8WXH5 440 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 SLCO2A1Q92959 643 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 ELMO3Q96BJ8 720 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 VCPIP1Q96JH7 1222 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 C16orf70Q9BSU1 422 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 TRIM31Q9BZY9 425 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 C2orf40Q9H1Z8 148 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 TUT1Q9H6E5 874 aaKnown RBP13.52□□□□□ -0.25
SNAI1-201ENST00000244050 LRRC19Q9H756 370 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 FLRT1Q9NZU1 646 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 ANKFY1Q9P2R3 1169 aa13.52□□□□□ -0.25
SNAI1-201ENST00000244050 PTPRJQ12913 1337 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 MYO1FO00160 1098 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 ADCY6O43306 1168 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 ZEB2O60315 1214 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 C22orf31O95567 290 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 RARAP10276 462 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 PTP4A2Q12974 167 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 IRF5Q13568 498 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 CCL14Q16627 93 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 CDCA2Q69YH5 1023 aaPredicted RBP13.51□□□□□ -0.25
SNAI1-201ENST00000244050 TTC27Q6P3X3 843 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 CHRDL2Q6WN34 429 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 SRLQ86TD4 932 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 USP6NLQ92738 828 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 ZBTB10Q96DT7 871 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 NLRP4Q96MN2 994 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 APBA2Q99767 749 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 RNF208Q9H0X6 261 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 PRO3102Q9H379 93 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 APOBEC3GQ9HC16 384 aaKnown RBP13.51□□□□□ -0.25
SNAI1-201ENST00000244050 GRHL1Q9NZI5 618 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 ANAPC7Q9UJX3 599 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 SNX24Q9Y343 169 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 COL1A2P08123 1366 aa13.51□□□□□ -0.25
SNAI1-201ENST00000244050 PRKCBP05771 671 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 CLTAP09496 248 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 NUDT17P0C025 328 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 NSFP46459 744 aaKnown RBP13.5□□□□□ -0.25
SNAI1-201ENST00000244050 DNAJC21Q5F1R6 531 aaKnown RBP13.5□□□□□ -0.25
SNAI1-201ENST00000244050 OLFML2BQ68BL8 750 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 MON1BQ7L1V2 547 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 CPNE8Q86YQ8 564 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 BRSK2Q8IWQ3 736 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 OR2W6PQ8NHA6 318 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 MAIP1Q8WWC4 291 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 FAM84AQ96KN4 292 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 MRPL4Q9BYD3 311 aaKnown RBP13.5□□□□□ -0.25
SNAI1-201ENST00000244050 UNC93B1Q9H1C4 597 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 RSPH14Q9UHP6 348 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 KAT6AQ92794 2004 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 MROH7Q68CQ1 1323 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 TCRBV7S2A1N4TA0A589 114 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 MAGEB2O15479 319 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 ASAP2O43150 1006 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 DYNC1LI2O43237 492 aaPredicted RBP13.5□□□□□ -0.25
SNAI1-201ENST00000244050 CALCAP01258 141 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 EDN1P05305 212 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 HOXD8P13378 290 aaPredicted RBP13.5□□□□□ -0.25
SNAI1-201ENST00000244050 RRM1P23921 792 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 MDH1P40925 334 aaKnown RBP13.5□□□□□ -0.25
SNAI1-201ENST00000244050 RPL21P46778 160 aaKnown RBP13.5□□□□□ -0.25
SNAI1-201ENST00000244050 FLT3LGP49771 235 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 ATP1A2P50993 1020 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 PLTPP55058 493 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 PDCLQ13371 301 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 MAPK6Q16659 721 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 ZBTB41Q5SVQ8 909 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 LIN9Q5TKA1 542 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 SPOPLQ6IQ16 392 aa13.5□□□□□ -0.25
SNAI1-201ENST00000244050 PHF13Q86YI8 300 aaPredicted RBP13.5□□□□□ -0.25
SNAI1-201ENST00000244050 SLAIN1Q8ND83 568 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms