RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 POLIQ9UNA4 740 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 CLASP1Q7Z460 1538 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 SUPT3HB4E1H0 165 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 PRAMEF18Q5VWM3 479 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 OR8H2Q8N162 312 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 GDPD5Q8WTR4 605 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 COQ7Q99807 217 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 ERP44Q9BS26 406 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 MRGBPQ9NV56 204 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 STK32BQ9NY57 414 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 CDC42BPBQ9Y5S2 1711 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 PKNOX1P55347 436 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 TEX9Q8N6V9 391 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 ISCUQ9H1K1 167 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 UBAP1Q9NZ09 502 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 CDK12Q9NYV4 1490 aaPredicted RBP7.87□□□□□ -1.15
RIF1-201ENST00000243326 ETS1P14921 441 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 RAP1GDS1P52306 607 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 ZNF555Q8NEP9 628 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 APC2O95996 2303 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 SMIM22K7EJ46 135 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 ANGPT2O15123 496 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 CALB1P05937 261 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 AKIRIN2Q53H80 203 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 GPATCH4Q5T3I0 446 aaKnown RBP7.87□□□□□ -1.15
RIF1-201ENST00000243326 CYP2R1Q6VVX0 501 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 FBXO25Q8TCJ0 367 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 RNF139Q8WU17 664 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 GCNAQ96QF7 691 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 BEGAINQ9BUH8 593 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 DIS3Q9Y2L1 958 aaKnown RBP7.87□□□□□ -1.15
RIF1-201ENST00000243326 ATP7BP35670 1465 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 ARHGAP10A1A4S6 786 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 APOL1O14791 398 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 CARTPTQ16568 116 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 QPCTQ16769 361 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 MEI1Q5TIA1 1274 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 C6orf203Q9P0P8 240 aaPredicted RBP7.87□□□□□ -1.15
RIF1-201ENST00000243326 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.87□□□□□ -1.152e-6■■□□□ 11.5
RIF1-201ENST00000243326 CCDC22O60826 627 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 SH3BGRLO75368 114 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 TRIM16LQ309B1 348 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 PID1Q7Z2X4 250 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 METTL23Q86XA0 190 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 PBXIP1Q96AQ6 731 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 RUSC1Q9BVN2 902 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 BRWD1Q9NSI6 2320 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 FAM86B1E9PN63 330 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 BBS2Q9BXC9 721 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 MBD5Q9P267 1494 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 GOLGA8TH3BQL2 631 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 TMEM121Q9BTD3 319 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 PSD3Q9NYI0 1048 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 MED14O60244 1454 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 TBC1D12O60347 775 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 DDI2Q5TDH0 399 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 KLHDC7AQ5VTJ3 777 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 ATP8B4Q8TF62 1192 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 GLMNQ92990 594 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 MAP3K14Q99558 947 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 UBP1Q9NZI7 540 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 USP6P35125 1406 aa7.87□□□□□ -1.15
RIF1-201ENST00000243326 GLI2P10070 1586 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 TMEM150BA6NC51 233 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 IPO5O00410 1097 aaKnown RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 ZBTB5O15062 677 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 SERPINB2P05120 415 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 MSX2P35548 267 aaPredicted RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 PKD2L2Q9NZM6 624 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 KRT8P05787 483 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 IRF1P10914 325 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 NPEPPSP55786 919 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 GTF2H3Q13889 308 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 NAALADL2Q58DX5 795 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 HEATR6Q6AI08 1181 aaKnown RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 C16orf46Q6P387 395 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 SLC47A2Q86VL8 602 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 WWP1Q9H0M0 922 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 L2HGDHQ9H9P8 463 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 SH3GLB2Q9NR46 395 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 CRKP46108 304 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 PAPOLAP51003 745 aaKnown RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 THEMIS2Q5TEJ8 643 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 TTC39BQ5VTQ0 682 aaPredicted RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 PROM2Q8N271 834 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 CCSER1Q9C0I3 900 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 MAD2L2Q9UI95 211 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 DNAJC16Q9Y2G8 782 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 HSMCR30P0CW71 290 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 FAM43BQ6ZT52 329 aaPredicted RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 ILDR1Q86SU0 546 aaPredicted RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 USP21Q9UK80 565 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 C2CD2Q9Y426 696 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 E5RI56 91 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 MAGP20916 626 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 ANGPT1Q15389 498 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 PERM1Q5SV97 790 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 TSHZ1Q6ZSZ6 1077 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 ARHGAP27Q6ZUM4 889 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms