RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 KRT83P78385 493 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 FUT10Q6P4F1 479 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 RTN4RL1Q86UN2 441 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 MICALL1Q8N3F8 863 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 NRDE2Q9H7Z3 1164 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 CST3P01034 146 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 KLRC2P26717 231 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 CDC25BP30305 580 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 SOX5P35711 763 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 PBX3P40426 434 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 NSFP46459 744 aaKnown RBP11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 RAP1GAPP47736 663 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 RABGGTBP53611 331 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 VEPH1Q14D04 833 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 WSCD1Q658N2 575 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 ANKS3Q6ZW76 656 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 FBXO22Q8NEZ5 403 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 ELMO3Q96BJ8 720 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 TTPALQ9BTX7 342 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 PLCB1Q9NQ66 1216 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 CISHQ9NSE2 258 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 LRRC53A6NM62 1247 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 CYP26A1O43174 497 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 IGFBP4P22692 258 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 LILRA4P59901 499 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 FAM189BP81408 668 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 SHHQ15465 462 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 STILQ15468 1287 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 GJB7Q6PEY0 223 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 PIDD1Q9HB75 910 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 ASS1P00966 412 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 SRGAP2BP0DMP2 458 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 SKILP12757 684 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 GRIK1P39086 918 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 KLK7P49862 253 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 CDH8P55286 799 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 NFE2Q16621 373 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 CLLU1OSQ5K130 101 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 ZNF280BQ86YH2 543 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 KCNN1Q92952 543 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 ZMAT2Q96NC0 199 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 TGS1Q96RS0 853 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 OSBPL7Q9BZF2 842 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 MIOSQ9NXC5 875 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 BARX2Q9UMQ3 279 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 GCNT1Q02742 428 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 MGAT5BQ3V5L5 792 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 IQCEQ6IPM2 695 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 ACOT1Q86TX2 421 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 VPS52Q8N1B4 723 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 FAM49BQ9NUQ9 324 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 ABI2Q9NYB9 513 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 DPP7Q9UHL4 492 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 ZSCAN12O43309 604 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 CXCL14O95715 111 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 ITGB8P26012 769 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 SLC11A1P49279 550 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 CREMQ03060 361 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 SIX6OS1Q8N1H7 587 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 SYT15Q9BQS2 421 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 NAA15Q9BXJ9 866 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 LOXHD1Q8IVV2 1947 aa11.86□□□□□ -0.51
TNFAIP3-201ENST00000237289 M0QYV0 167 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 GLUD2P49448 558 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 CDR1P51861 262 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 TMEM35BQ8NCS4 154 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 CTNNBL1Q8WYA6 563 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 SEPT5Q99719 369 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 KIAA1257Q9ULG3 409 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 FAM170AA1A519 330 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 SERPING1P05155 500 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 GALTP07902 379 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 MIIPQ5JXC2 388 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 CCDC122Q5T0U0 273 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 PPP1R2P3Q6NXS1 205 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 TOP6BLQ8N6T0 577 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 SAMD11Q96NU1 681 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 GCNAQ96QF7 691 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 MED15Q96RN5 788 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 CACNG4Q9UBN1 327 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 FSD2A1L4K1 749 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 CAPN9O14815 690 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 DGKIO75912 1065 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 ACAT1P24752 427 aaKnown RBP11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 NDST1P52848 882 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 GPM6BQ13491 265 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 PSMD5Q16401 504 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 DCUN1D2Q6PH85 259 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 ZNF516Q92618 1163 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 PPP1R10Q96QC0 940 aaKnown RBP11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 CXXC1Q9P0U4 656 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 DNAJB4Q9UDY4 337 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 CAPN11Q9UMQ6 739 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 PTGESO14684 152 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 ALDH1A3P47895 512 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 ZC3H3Q8IXZ2 948 aaKnown RBP11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 TDHQ8IZJ6 230 aa11.85□□□□□ -0.51
TNFAIP3-201ENST00000237289 TMEM176AQ96HP8 235 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms