RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CISHQ9NSE2 258 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 ATXN2Q99700 1313 aaKnown RBP17.18■□□□□ 0.34
UBE3D-201ENST00000237186 ZNFX1Q9P2E3 1918 aaKnown RBP17.17■□□□□ 0.34
UBE3D-201ENST00000237186 DCDC2CA8MYV0 355 aa17.17■□□□□ 0.34
UBE3D-201ENST00000237186 TRAPPC3O43617 180 aa17.17■□□□□ 0.34
UBE3D-201ENST00000237186 GAS8O95995 478 aa17.17■□□□□ 0.34
UBE3D-201ENST00000237186 EIF4BP23588 611 aaKnown RBP17.17■□□□□ 0.34
UBE3D-201ENST00000237186 EPHX2P34913 555 aa17.17■□□□□ 0.34
UBE3D-201ENST00000237186 TMEM35BQ8NCS4 154 aa17.17■□□□□ 0.34
UBE3D-201ENST00000237186 MYCBPAPQ8TBZ2 947 aa17.17■□□□□ 0.34
UBE3D-201ENST00000237186 OSBPL8Q9BZF1 889 aa17.17■□□□□ 0.34
UBE3D-201ENST00000237186 ROPN1BQ9BZX4 212 aaPredicted RBP17.17■□□□□ 0.34
UBE3D-201ENST00000237186 ROPN1Q9HAT0 212 aaPredicted RBP17.17■□□□□ 0.34
UBE3D-201ENST00000237186 AAASQ9NRG9 546 aa17.17■□□□□ 0.34
UBE3D-201ENST00000237186 TNFSF13BQ9Y275 285 aa17.17■□□□□ 0.34
UBE3D-201ENST00000237186 RALAP11233 206 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 OSBPP22059 807 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 NF2P35240 595 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 TAP1Q03518 808 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 ATF7IP2Q5U623 682 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 SHCBP1Q8NEM2 672 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 ZNF473Q8WTR7 871 aaKnown RBP17.16■□□□□ 0.34
UBE3D-201ENST00000237186 SNF8Q96H20 258 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 GMNCA6NCL1 334 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 O00370 1275 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 AGTP01019 485 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 CETN2P41208 172 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 MMP13P45452 471 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 TRPC3Q13507 836 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 GPR162Q16538 588 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 PPP1R15BQ5SWA1 713 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 GPAT2Q6NUI2 795 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 RHPN2Q8IUC4 686 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 RCOR2Q8IZ40 523 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 ZC3H15Q8WU90 426 aaKnown RBP17.16■□□□□ 0.34
UBE3D-201ENST00000237186 RABEP2Q9H5N1 569 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 FAM169AQ9Y6X4 670 aa17.16■□□□□ 0.34
UBE3D-201ENST00000237186 LRRC37A2A6NM11 1700 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 IL18RAPO95256 599 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 ASPAP45381 313 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 CDR1P51861 262 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 SEC24CP53992 1094 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 YWHAEP62258 255 aaKnown RBP17.15■□□□□ 0.34
UBE3D-201ENST00000237186 SNX1Q13596 522 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 TTLL4Q14679 1199 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 SKIDA1Q1XH10 827 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 MFSD5Q6N075 450 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 FBXO16Q8IX29 292 aaPredicted RBP17.15■□□□□ 0.34
UBE3D-201ENST00000237186 WDTC1Q8N5D0 677 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 NIPA2Q8N8Q9 360 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 ATG4AQ8WYN0 398 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 CDCA5Q96FF9 252 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 ANKRD36BP1Q96IX9 119 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 RBM41Q96IZ5 413 aaKnown RBP17.15■□□□□ 0.34
UBE3D-201ENST00000237186 ASIC3Q9UHC3 531 aa17.15■□□□□ 0.34
UBE3D-201ENST00000237186 R3HDM2Q9Y2K5 976 aaKnown RBP17.15■□□□□ 0.34
UBE3D-201ENST00000237186 ASB14A6NK59 587 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 TRIM66O15016 1216 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 TNNC2P02585 160 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 TXNP10599 105 aaKnown RBP17.14■□□□□ 0.33
UBE3D-201ENST00000237186 TMOD1P28289 359 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 PTPN7P35236 360 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 MAGEA9P43362 315 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 RPL7AP62424 266 aaKnown RBP17.14■□□□□ 0.33
UBE3D-201ENST00000237186 MBTD1Q05BQ5 628 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 NFX1Q12986 1120 aaKnown RBP17.14■□□□□ 0.33
UBE3D-201ENST00000237186 LLGL1Q15334 1064 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 FAM187BQ17R55 369 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 ZNF699Q32M78 642 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 EFCAB12Q6NXP0 572 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 DRICH1Q6PGQ1 229 aaPredicted RBP17.14■□□□□ 0.33
UBE3D-201ENST00000237186 CCDC50Q8IVM0 306 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 CCDC89Q8N998 374 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 BBOF1Q8ND07 529 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 TRAIPQ9BWF2 469 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 LHX5Q9H2C1 402 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 E7EVH7 732 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 RGS16O15492 202 aaPredicted RBP17.14■□□□□ 0.33
UBE3D-201ENST00000237186 FGFR4P22455 802 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 SSTR3P32745 418 aaPredicted RBP17.14■□□□□ 0.33
UBE3D-201ENST00000237186 COPS2P61201 443 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 IRX5P78411 483 aaPredicted RBP17.14■□□□□ 0.33
UBE3D-201ENST00000237186 TFAMQ00059 246 aaKnown RBP17.14■□□□□ 0.33
UBE3D-201ENST00000237186 PIGHQ14442 188 aaPredicted RBP17.14■□□□□ 0.33
UBE3D-201ENST00000237186 ZNF484Q5JVG2 852 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 DAB2IPQ5VWQ8 1189 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 ARMC9Q7Z3E5 817 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 YTHDF3Q7Z739 585 aaKnown RBP17.14■□□□□ 0.33
UBE3D-201ENST00000237186 IFNLR1Q8IU57 520 aaPredicted RBP17.14■□□□□ 0.33
UBE3D-201ENST00000237186 RELL1Q8IUW5 271 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 RAPGEF5Q92565 580 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 FAM212AQ96EL1 285 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 HEMGNQ9BXL5 484 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 STMN4Q9H169 189 aaPredicted RBP17.14■□□□□ 0.33
UBE3D-201ENST00000237186 CDC42EP4Q9H3Q1 356 aaKnown RBP17.14■□□□□ 0.33
UBE3D-201ENST00000237186 PRMT7Q9NVM4 692 aaPredicted RBP17.14■□□□□ 0.33
UBE3D-201ENST00000237186 ERAP1Q9NZ08 941 aa17.14■□□□□ 0.33
UBE3D-201ENST00000237186 OTOFQ9HC10 1997 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 A0A087WUV0 522 aaPredicted RBP17.13■□□□□ 0.33
UBE3D-201ENST00000237186 C5orf60A6NFR6 353 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms