RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 OAZ2O95190 189 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 CST3P01034 146 aaPredicted RBP13.66□□□□□ -0.22
LSM5-201ENST00000223084 CD44P16070 742 aaKnown RBP13.66□□□□□ -0.22
LSM5-201ENST00000223084 BMP6P22004 513 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 SSTR3P32745 418 aaPredicted RBP13.66□□□□□ -0.22
LSM5-201ENST00000223084 PNPLA4P41247 253 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 CDR1P51861 262 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 PMS1P54277 932 aaKnown RBP13.66□□□□□ -0.22
LSM5-201ENST00000223084 DLG4P78352 724 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 ADAM9Q13443 819 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 MYBPC2Q14324 1141 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 NFIL3Q16649 462 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 ATAT1Q5SQI0 421 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 TRAPPC11Q7Z392 1133 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 GPR149Q86SP6 731 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 ADHFE1Q8IWW8 467 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 ADSSL1Q8N142 457 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 PARD3BQ8TEW8 1205 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 HDAC7Q8WUI4 952 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 TMEM174Q8WUU8 243 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 ZNF707Q96C28 371 aaPredicted RBP13.66□□□□□ -0.22
LSM5-201ENST00000223084 LMBRD1Q9NUN5 540 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 DPP7Q9UHL4 492 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 RAPGEFL1Q9UHV5 662 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 FRMD4BQ9Y2L6 1034 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 TSC2P49815 1807 aa13.66□□□□□ -0.22
LSM5-201ENST00000223084 TRIM49BA6NDI0 452 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 ABCB7O75027 752 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 ABLIM3O94929 683 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 SEC24AO95486 1093 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 C1RP00736 705 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 CYP11A1P05108 521 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 C8AP07357 584 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 PAX3P23760 479 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 MTHFRP42898 656 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 MORC3Q14149 939 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 COBLL1Q53SF7 1204 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 LIN9Q5TKA1 542 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 ANKRD40Q6AI12 368 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 CENPPQ6IPU0 288 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 ELMSAN1Q6PJG2 1045 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 RNF19BQ6ZMZ0 732 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 METTL23Q86XA0 190 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 GJD3Q8N144 294 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 LRRC52Q8N7C0 313 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 CMASQ8NFW8 434 aaPredicted RBP13.65□□□□□ -0.22
LSM5-201ENST00000223084 ZNF461Q8TAF7 563 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 SLC7A14Q8TBB6 771 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 SMG7Q92540 1137 aaKnown RBP13.65□□□□□ -0.22
LSM5-201ENST00000223084 HPDLQ96IR7 371 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 RPGRIP1Q96KN7 1286 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 RIPOR3Q96MK2 946 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 RTP3Q9BQQ7 232 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 PHF7Q9BWX1 381 aaPredicted RBP13.65□□□□□ -0.22
LSM5-201ENST00000223084 PRKD2Q9BZL6 878 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 PRKAG3Q9UGI9 489 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 L1RE1Q9UN81 338 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 R3HCC1Q9Y3T6 440 aaKnown RBP13.65□□□□□ -0.22
LSM5-201ENST00000223084 SNX9Q9Y5X1 595 aa13.65□□□□□ -0.22
LSM5-201ENST00000223084 C19orf67A6NJJ6 358 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 OR6C75A6NL08 312 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 CCL16O15467 120 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 VNN2O95498 520 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 CPB1P15086 417 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 RPL13P26373 211 aaKnown RBP13.64□□□□□ -0.23
LSM5-201ENST00000223084 ELF1P32519 619 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 ADCY1Q08828 1119 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 EDRF1Q3B7T1 1238 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 PPM1LQ5SGD2 360 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 C1orf220Q5T0J3 134 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 TDRD10Q5VZ19 366 aaKnown RBP13.64□□□□□ -0.23
LSM5-201ENST00000223084 KLHL10Q6JEL2 608 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 FAM186BQ8IYM0 893 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 PDCL2Q8N4E4 241 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 OR10T2Q8NGX3 314 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 ELMO3Q96BJ8 720 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 PGLYRP2Q96PD5 576 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 GBP4Q96PP9 640 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 ZDHHC7Q9NXF8 308 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 DSEQ9UL01 958 aa13.64□□□□□ -0.23
LSM5-201ENST00000223084 MYO10Q9HD67 2058 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 ARHGEF37A1IGU5 675 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 PPP1R3GB7ZBB8 358 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 TNFRSF10AO00220 468 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 PRRG1O14668 218 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 HCRTO43612 131 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 PHACTR2O75167 634 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 C4BPAP04003 597 aaKnown RBP13.63□□□□□ -0.23
LSM5-201ENST00000223084 TRIM49P0CI25 452 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 TRIM49CP0CI26 452 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 ATF2P15336 505 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 PSMC2P35998 433 aaKnown RBP13.63□□□□□ -0.23
LSM5-201ENST00000223084 VAMP7P51809 220 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 MYL6P60660 151 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 CLDN10P78369 228 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 NTHL1P78549 312 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 MYO1EQ12965 1108 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 BIRC3Q13489 604 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 TRPC3Q13507 836 aa13.63□□□□□ -0.23
LSM5-201ENST00000223084 C15orf39Q6ZRI6 1047 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms