RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 RASGRF2O14827 1237 aa23.58■■□□□ 1.36
CCDC9-201ENST00000221922 TP73O15350 636 aa23.58■■□□□ 1.36
CCDC9-201ENST00000221922 CALCAP01258 141 aa23.58■■□□□ 1.36
CCDC9-201ENST00000221922 GNA15P30679 374 aa23.58■■□□□ 1.36
CCDC9-201ENST00000221922 ZBTB41Q5SVQ8 909 aa23.58■■□□□ 1.36
CCDC9-201ENST00000221922 TMEM270Q6UE05 265 aa23.58■■□□□ 1.36
CCDC9-201ENST00000221922 FBXO16Q8IX29 292 aaPredicted RBP23.58■■□□□ 1.36
CCDC9-201ENST00000221922 DHX37Q8IY37 1157 aaKnown RBP23.58■■□□□ 1.36
CCDC9-201ENST00000221922 MRPL47Q9HD33 250 aaKnown RBP23.58■■□□□ 1.36
CCDC9-201ENST00000221922 PNMA3Q9UL41 463 aa23.58■■□□□ 1.36
CCDC9-201ENST00000221922 SMIM23A6NLE4 172 aa23.57■■□□□ 1.36
CCDC9-201ENST00000221922 MSCO60682 206 aa23.57■■□□□ 1.36
CCDC9-201ENST00000221922 SCTRP47872 440 aa23.57■■□□□ 1.36
CCDC9-201ENST00000221922 NCOA4Q13772 614 aa23.57■■□□□ 1.36
CCDC9-201ENST00000221922 TRIM50Q86XT4 487 aa23.57■■□□□ 1.36
CCDC9-201ENST00000221922 CCDC197Q8NCU1 140 aa23.57■■□□□ 1.36
CCDC9-201ENST00000221922 SPATA33Q96N06 139 aa23.57■■□□□ 1.36
CCDC9-201ENST00000221922 JPH2Q9BR39 696 aaPredicted RBP23.57■■□□□ 1.36
CCDC9-201ENST00000221922 INTS9Q9NV88 658 aaKnown RBP23.57■■□□□ 1.36
CCDC9-201ENST00000221922 MARK3P27448 753 aa23.56■■□□□ 1.36
CCDC9-201ENST00000221922 MAN1A1P33908 653 aa23.56■■□□□ 1.36
CCDC9-201ENST00000221922 PTP4A2Q12974 167 aa23.56■■□□□ 1.36
CCDC9-201ENST00000221922 CALCOCO2Q13137 446 aa23.56■■□□□ 1.36
CCDC9-201ENST00000221922 MKRN4PQ13434 485 aaPredicted RBP23.56■■□□□ 1.36
CCDC9-201ENST00000221922 WDR49Q8IV35 697 aa23.56■■□□□ 1.36
CCDC9-201ENST00000221922 RBBP8NLQ8NC74 664 aaPredicted RBP23.56■■□□□ 1.36
CCDC9-201ENST00000221922 ASB14A6NK59 587 aa23.56■■□□□ 1.36
CCDC9-201ENST00000221922 TOM1L1O75674 476 aa23.56■■□□□ 1.36
CCDC9-201ENST00000221922 NOMO3P69849 1222 aa23.56■■□□□ 1.36
CCDC9-201ENST00000221922 LAMTOR4Q0VGL1 99 aa23.56■■□□□ 1.36
CCDC9-201ENST00000221922 ITIH4Q14624 930 aa23.56■■□□□ 1.36
CCDC9-201ENST00000221922 PPP1R7Q15435 360 aa23.56■■□□□ 1.36
CCDC9-201ENST00000221922 PHF13Q86YI8 300 aaPredicted RBP23.56■■□□□ 1.36
CCDC9-201ENST00000221922 ZBTB8OSQ8IWT0 167 aa23.56■■□□□ 1.36
CCDC9-201ENST00000221922 OR5B17Q8NGF7 314 aa23.56■■□□□ 1.36
CCDC9-201ENST00000221922 SCINQ9Y6U3 715 aa23.56■■□□□ 1.36
CCDC9-201ENST00000221922 UNCXA6NJT0 531 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 PROSCO94903 275 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 SURF1Q15526 300 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 SGO2Q562F6 1265 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 WDR78Q5VTH9 848 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 RHBDF2Q6PJF5 856 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 C2orf40Q9H1Z8 148 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 SMARCAD1Q9H4L7 1026 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 AAASQ9NRG9 546 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 ADAM22Q9P0K1 906 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 NUB1Q9Y5A7 615 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 GLTPD2A6NH11 291 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 CCT8L1PA6NM43 557 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 FAM189A1O60320 539 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 TXNP10599 105 aaKnown RBP23.55■■□□□ 1.36
CCDC9-201ENST00000221922 HARSP12081 509 aaKnown RBP23.55■■□□□ 1.36
CCDC9-201ENST00000221922 ITIH2P19823 946 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 C1QBPQ07021 282 aaKnown RBP23.55■■□□□ 1.36
CCDC9-201ENST00000221922 TTLL4Q14679 1199 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 SMYD5Q6GMV2 418 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 CHADLQ6NUI6 762 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 SYDE1Q6ZW31 735 aaPredicted RBP23.55■■□□□ 1.36
CCDC9-201ENST00000221922 TAOK1Q7L7X3 1001 aa23.55■■□□□ 1.36
CCDC9-201ENST00000221922 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.55■■□□□ 1.36
CCDC9-201ENST00000221922 UHMK1Q8TAS1 419 aaKnown RBP23.55■■□□□ 1.36
CCDC9-201ENST00000221922 PSTPIP1O43586 416 aa23.54■■□□□ 1.36
CCDC9-201ENST00000221922 SLCO1A2P46721 670 aa23.54■■□□□ 1.36
CCDC9-201ENST00000221922 KRT17Q04695 432 aa23.54■■□□□ 1.36
CCDC9-201ENST00000221922 EAPPQ56P03 285 aaPredicted RBP23.54■■□□□ 1.36
CCDC9-201ENST00000221922 LRRC34Q8IZ02 419 aa23.54■■□□□ 1.36
CCDC9-201ENST00000221922 ANKS4BQ8N8V4 417 aa23.54■■□□□ 1.36
CCDC9-201ENST00000221922 SLC10A4Q96EP9 437 aa23.54■■□□□ 1.36
CCDC9-201ENST00000221922 TCHPQ9BT92 498 aa23.54■■□□□ 1.36
CCDC9-201ENST00000221922 THAP12O43422 761 aa23.53■■□□□ 1.36
CCDC9-201ENST00000221922 DNAJC8O75937 253 aaPredicted RBP23.53■■□□□ 1.36
CCDC9-201ENST00000221922 XRCC4Q13426 336 aa23.53■■□□□ 1.36
CCDC9-201ENST00000221922 CNGA2Q16280 664 aa23.53■■□□□ 1.36
CCDC9-201ENST00000221922 FUKQ8N0W3 1084 aa23.53■■□□□ 1.36
CCDC9-201ENST00000221922 C1orf54Q8WWF1 131 aa23.53■■□□□ 1.36
CCDC9-201ENST00000221922 ACO2Q99798 780 aaKnown RBP23.53■■□□□ 1.36
CCDC9-201ENST00000221922 PRMT1Q99873 361 aaKnown RBP23.53■■□□□ 1.36
CCDC9-201ENST00000221922 C11orf70Q9BRQ4 267 aa23.53■■□□□ 1.36
CCDC9-201ENST00000221922 CDC42EP4Q9H3Q1 356 aaKnown RBP23.53■■□□□ 1.36
CCDC9-201ENST00000221922 IQCA1LA6NCM1 817 aa23.53■■□□□ 1.36
CCDC9-201ENST00000221922 OGTO15294 1046 aa23.53■■□□□ 1.36
CCDC9-201ENST00000221922 ASS1P00966 412 aaKnown RBP23.53■■□□□ 1.36
CCDC9-201ENST00000221922 PRKCBP05771 671 aa23.53■■□□□ 1.36
CCDC9-201ENST00000221922 IVDP26440 423 aa23.53■■□□□ 1.36
CCDC9-201ENST00000221922 MAPK6Q16659 721 aa23.53■■□□□ 1.36
CCDC9-201ENST00000221922 RNF149Q8NC42 400 aa23.53■■□□□ 1.36
CCDC9-201ENST00000221922 TRIM7Q9C029 511 aa23.53■■□□□ 1.36
CCDC9-201ENST00000221922 PLXNA1Q9UIW2 1896 aa23.52■■□□□ 1.36
CCDC9-201ENST00000221922 TTLL13PA6NNM8 815 aa23.52■■□□□ 1.36
CCDC9-201ENST00000221922 HBP1O60381 514 aa23.52■■□□□ 1.36
CCDC9-201ENST00000221922 ZNF132P52740 706 aa23.52■■□□□ 1.36
CCDC9-201ENST00000221922 PTK6Q13882 451 aa23.52■■□□□ 1.36
CCDC9-201ENST00000221922 PLEKHA7Q6IQ23 1121 aa23.52■■□□□ 1.36
CCDC9-201ENST00000221922 EXOC3L1Q86VI1 746 aa23.52■■□□□ 1.36
CCDC9-201ENST00000221922 LRRC71Q8N4P6 559 aa23.52■■□□□ 1.36
CCDC9-201ENST00000221922 GRK7Q8WTQ7 553 aa23.52■■□□□ 1.36
CCDC9-201ENST00000221922 COPS5Q92905 334 aa23.52■■□□□ 1.36
CCDC9-201ENST00000221922 DDX27Q96GQ7 796 aaKnown RBP23.52■■□□□ 1.36
CCDC9-201ENST00000221922 SERPINB12Q96P63 405 aa23.52■■□□□ 1.36
CCDC9-201ENST00000221922 HOMER3Q9NSC5 361 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms