RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 FASTKD3Q14CZ7 662 aaKnown RBP15.5■□□□□ 0.07
CNOT3-201ENST00000221232 TMED2Q15363 201 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 KCNT1Q5JUK3 1230 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 POTEAQ6S8J7 498 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 VSTM1Q6UX27 236 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 GRK7Q8WTQ7 553 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 FAM81BQ96LP2 452 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 RBM15Q96T37 977 aaKnown RBP eCLIP15.5■□□□□ 0.072e-6■■□□□ 12.2
CNOT3-201ENST00000221232 PCYT2Q99447 389 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 STMN4Q9H169 189 aaPredicted RBP15.5■□□□□ 0.07
CNOT3-201ENST00000221232 SAYSD1Q9NPB0 183 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 KRT19P08727 400 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 NAMPTP43490 491 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 OGDHQ02218 1023 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 KLF1Q13351 362 aaPredicted RBP15.5■□□□□ 0.07
CNOT3-201ENST00000221232 IMPG2Q9BZV3 1241 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 ZWILCHQ9H900 591 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 HOMER3Q9NSC5 361 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 GGA3Q9NZ52 723 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 AFG3L2Q9Y4W6 797 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 MAFBQ9Y5Q3 323 aaPredicted RBP15.5■□□□□ 0.07
CNOT3-201ENST00000221232 CNTNAP2Q9UHC6 1331 aa15.5■□□□□ 0.07
CNOT3-201ENST00000221232 ATXN2Q99700 1313 aaKnown RBP15.49■□□□□ 0.07
CNOT3-201ENST00000221232 LRRD1A4D1F6 860 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 UBA1P22314 1058 aaKnown RBP15.49■□□□□ 0.07
CNOT3-201ENST00000221232 ARL2P36404 184 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 RAP1GAPP47736 663 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 STAT5BP51692 787 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 ZNF677Q86XU0 584 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 CEP120Q8N960 986 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 TRIM11Q96F44 468 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 CGRRF1Q99675 332 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 TMEM121Q9BTD3 319 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 PARVAQ9NVD7 372 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 HOXC10Q9NYD6 342 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 GGA2Q9UJY4 613 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 NFASCO94856 1347 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 CD19P15391 556 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 TCF7P36402 384 aaPredicted RBP15.49■□□□□ 0.07
CNOT3-201ENST00000221232 ARSEP51690 589 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 RTP1P59025 263 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 CLDN10P78369 228 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 PTP4A2Q12974 167 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 GPS1Q13098 491 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 SYCP2LQ5T4T6 812 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 SLFN12LQ6IEE8 588 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 GPAT2Q6NUI2 795 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 HIBCHQ6NVY1 386 aaPredicted RBP15.49■□□□□ 0.07
CNOT3-201ENST00000221232 FAM47EQ6ZV65 393 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 TBC1D1Q86TI0 1168 aaPredicted RBP15.49■□□□□ 0.07
CNOT3-201ENST00000221232 CEP57Q86XR8 500 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 RNF149Q8NC42 400 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 C3orf20Q8ND61 904 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 MAIP1Q8WWC4 291 aa15.49■□□□□ 0.07
CNOT3-201ENST00000221232 PIK3R2O00459 728 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 PGK2P07205 417 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 CDH8P55286 799 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 TGFB2P61812 414 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 CCNG2Q16589 344 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 TMEM63BQ5T3F8 832 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 PLEKHA7Q6IQ23 1121 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 PIGWQ7Z7B1 504 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 FUKQ8N0W3 1084 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 TFAP2BQ92481 460 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 ROPN1BQ9BZX4 212 aaPredicted RBP15.48■□□□□ 0.07
CNOT3-201ENST00000221232 KIF9Q9HAQ2 790 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 ROPN1Q9HAT0 212 aaPredicted RBP15.48■□□□□ 0.07
CNOT3-201ENST00000221232 H0YCG3 227 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 MAGEA4P43358 317 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 ZNF252P-AS1Q0IIN9 211 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 TRPC3Q13507 836 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 ZNF568Q3ZCX4 644 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 WDR78Q5VTH9 848 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 DNAJC24Q6P3W2 148 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 CYB5D1Q6P9G0 228 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 ANKMY2Q8IV38 441 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 CCDC89Q8N998 374 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 TCP11Q8WWU5 503 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 KLRG1Q96E93 195 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 NLRP4Q96MN2 994 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 SERPINB12Q96P63 405 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 TMEM109Q9BVC6 243 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 CISHQ9NSE2 258 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 BTBD7Q9P203 1132 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 ADAMTS5Q9UNA0 930 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 POLIQ9UNA4 740 aa15.48■□□□□ 0.07
CNOT3-201ENST00000221232 RASSF9O75901 435 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 STX2P32856 288 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 GAD2Q05329 585 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 ARMC9Q7Z3E5 817 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 PNMA8AQ86V59 439 aaPredicted RBP15.47■□□□□ 0.07
CNOT3-201ENST00000221232 RHPN2Q8IUC4 686 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 SLCO2A1Q92959 643 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 VPS33BQ9H267 617 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 ACTR5Q9H9F9 607 aaPredicted RBP15.47■□□□□ 0.07
CNOT3-201ENST00000221232 VPS37BQ9H9H4 285 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 STYXL1Q9Y6J8 313 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 SGK1O00141 431 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 B4GALT5O43286 388 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 E2F5Q15329 346 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms