RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 PRKCEQ02156 737 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 MAMLD1Q13495 774 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 MTMR2Q13614 643 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 CUL2Q13617 745 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 MTFR1Q15390 333 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 RHPN2Q8IUC4 686 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 MCPH1Q8NEM0 835 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 DDX1Q92499 740 aaKnown RBP11.81□□□□□ -0.52
NEFM-201ENST00000221166 RBM41Q96IZ5 413 aaKnown RBP11.81□□□□□ -0.52
NEFM-201ENST00000221166 TRIM6Q9C030 488 aaPredicted RBP11.81□□□□□ -0.52
NEFM-201ENST00000221166 CCDC134Q9H6E4 229 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 ZFP69BQ9UJL9 534 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 USH1CQ9Y6N9 552 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 CFAP69A5D8W1 941 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 CCND2P30279 289 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 WDR4P57081 412 aaKnown RBP11.81□□□□□ -0.52
NEFM-201ENST00000221166 GCNT1Q02742 428 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 RSBN1LQ6PCB5 846 aaPredicted RBP11.81□□□□□ -0.52
NEFM-201ENST00000221166 RFX8Q6ZV50 586 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 VPS52Q8N1B4 723 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 GRAMD1AQ96CP6 724 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 RPAP3Q9H6T3 665 aaPredicted RBP11.81□□□□□ -0.52
NEFM-201ENST00000221166 IP6K2Q9UHH9 426 aa11.81□□□□□ -0.52
NEFM-201ENST00000221166 WEE2P0C1S8 567 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 SSTR1P30872 391 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 YWHAGP61981 247 aaKnown RBP eCLIP11.8□□□□□ -0.52
NEFM-201ENST00000221166 PRKG1Q13976 671 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 ZNF516Q92618 1163 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 TTC17Q96AE7 1141 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 MCUR1Q96AQ8 359 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 ATG4CQ96DT6 458 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 CALN1Q9BXU9 219 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 KIAA1586Q9HCI6 787 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 COL5A3P25940 1745 aaPredicted RBP11.8□□□□□ -0.52
NEFM-201ENST00000221166 DKC1O60832 514 aaKnown RBP eCLIP11.8□□□□□ -0.52
NEFM-201ENST00000221166 STAM2O75886 525 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 IVDP26440 423 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 HSD17B4P51659 736 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 SNRPFP62306 86 aaKnown RBP11.8□□□□□ -0.52
NEFM-201ENST00000221166 ZNF268Q14587 947 aaPredicted RBP11.8□□□□□ -0.52
NEFM-201ENST00000221166 TDRD10Q5VZ19 366 aaKnown RBP11.8□□□□□ -0.52
NEFM-201ENST00000221166 SLC39A4Q6P5W5 647 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 RFX6Q8HWS3 928 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 RCOR2Q8IZ40 523 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 ABRAQ8N0Z2 381 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 TIPINQ9BVW5 301 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 AVENQ9NQS1 362 aaPredicted RBP11.8□□□□□ -0.52
NEFM-201ENST00000221166 EXTL3O43909 919 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 DGAT1O75907 488 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 UPP2O95045 317 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 UNGP13051 313 aaPredicted RBP11.8□□□□□ -0.52
NEFM-201ENST00000221166 PSMA2P25787 234 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 RASSF2P50749 326 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 NCOA4Q13772 614 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 SNRNP48Q6IEG0 339 aaKnown RBP11.8□□□□□ -0.52
NEFM-201ENST00000221166 SCYL3Q8IZE3 742 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 MAGEC3Q8TD91 643 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 CLEC4DQ8WXI8 215 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 MFSD14AQ96MC6 490 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 DONSONQ9NYP3 566 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 UMODL1Q5DID0 1318 aa11.8□□□□□ -0.52
NEFM-201ENST00000221166 PSTPIP1O43586 416 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 DCTN3O75935 186 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 SRGAP2CP0DJJ0 459 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 PHBP35232 272 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 HIF1AQ16665 826 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 ZBTB41Q5SVQ8 909 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 ANKRD20A3Q5VUR7 823 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 RHBDF2Q6PJF5 856 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 C3orf62Q6ZUJ4 267 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 MYPNQ86TC9 1320 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 EXD1Q8NHP7 514 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 HSPH1Q92598 858 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 PPP1R12CQ9BZL4 782 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 PXMP2Q9NR77 195 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 FBXO40Q9UH90 709 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 TELO2Q9Y4R8 837 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 ADGRA3Q8IWK6 1321 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 GRIN3BO60391 1043 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 NPM3O75607 178 aaKnown RBP11.79□□□□□ -0.52
NEFM-201ENST00000221166 MT-ND3P03897 115 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 FDX1P10109 184 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 EPHB2P29323 1055 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 ORC1Q13415 861 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 EEPD1Q7L9B9 569 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 SLC7A3Q8WY07 619 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 TTC25Q96NG3 672 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 MAK16Q9BXY0 300 aaKnown RBP11.79□□□□□ -0.52
NEFM-201ENST00000221166 YIPF3Q9GZM5 350 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 KIAA1683Q9H0B3 1180 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 DNALI1O14645 258 aaPredicted RBP11.79□□□□□ -0.52
NEFM-201ENST00000221166 ZNF862O60290 1169 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 CRYMQ14894 314 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 SLC1A5Q15758 541 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 MUM1Q2TAK8 710 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 TAF1BQ53T94 588 aaPredicted RBP11.79□□□□□ -0.52
NEFM-201ENST00000221166 B3GNT9Q6UX72 402 aa11.79□□□□□ -0.52
NEFM-201ENST00000221166 CRELD2Q6UXH1 353 aaPredicted RBP11.79□□□□□ -0.52
NEFM-201ENST00000221166 MTDHQ86UE4 582 aaKnown RBP11.79□□□□□ -0.52
NEFM-201ENST00000221166 ZCCHC9Q8N567 271 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms