RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 RAB3IPQ96QF0 476 aaPredicted RBP10.3□□□□□ -0.76
CSTF1-201ENST00000217109 STRIP2Q9ULQ0 834 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 C19orf81C9J6K1 198 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 NDC80O14777 642 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 MAPK13O15264 365 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 KRT7P08729 469 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 TXNP10599 105 aaKnown RBP10.3□□□□□ -0.76
CSTF1-201ENST00000217109 EIF3EP60228 445 aaKnown RBP10.3□□□□□ -0.76
CSTF1-201ENST00000217109 GCNT1Q02742 428 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 XRRA1Q6P2D8 792 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 CYB5D1Q6P9G0 228 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 SYDE1Q6ZW31 735 aaPredicted RBP10.3□□□□□ -0.76
CSTF1-201ENST00000217109 ZNF677Q86XU0 584 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 ZNF354CQ86Y25 554 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 GBP7Q8N8V2 638 aaPredicted RBP10.3□□□□□ -0.76
CSTF1-201ENST00000217109 UBA3Q8TBC4 463 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 KCNV2Q8TDN2 545 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 RNF34Q969K3 372 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 DCLK3Q9C098 648 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 PDGFDQ9GZP0 370 aaPredicted RBP10.3□□□□□ -0.76
CSTF1-201ENST00000217109 ELP3Q9H9T3 547 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 SAE1Q9UBE0 346 aaPredicted RBP10.3□□□□□ -0.76
CSTF1-201ENST00000217109 TPX2Q9ULW0 747 aaKnown RBP10.3□□□□□ -0.76
CSTF1-201ENST00000217109 ARL2BPQ9Y2Y0 163 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 CCDC88AQ3V6T2 1871 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 ZMYM2Q9UBW7 1377 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 FAM47DPA6NHR8 397 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 PTGER2P43116 358 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 ERFP50548 548 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 DCAF12L1Q5VU92 463 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 C3orf62Q6ZUJ4 267 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 FAM167AQ96KS9 214 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 TTC25Q96NG3 672 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 SERPINB12Q96P63 405 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 NIF3L1Q9GZT8 377 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 WHRNQ9P202 907 aa10.3□□□□□ -0.76
CSTF1-201ENST00000217109 F8VP50 259 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 CHKAP35790 457 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 CLCN3P51790 818 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 DRP2Q13474 957 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 MFSD7Q6UXD7 560 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 DPP9Q86TI2 863 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 APOBEC3FQ8IUX4 373 aaKnown RBP10.29□□□□□ -0.76
CSTF1-201ENST00000217109 SLC13A1Q9BZW2 595 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 CISHQ9NSE2 258 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 SYNPO2Q9UMS6 1093 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 AGAP1Q9UPQ3 857 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 NAALADL1Q9UQQ1 740 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 GRIN2DO15399 1336 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 CPP00450 1065 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 SAT1P21673 171 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 ADSSP30520 456 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 RAP1GAPP47736 663 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 CFAP157Q5JU67 520 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 FAM71DQ8N9W8 422 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 TTC16Q8NEE8 873 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 OR5B17Q8NGF7 314 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 TRAPPC12Q8WVT3 735 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 PIK3R5Q8WYR1 880 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 MAML1Q92585 1016 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 PGM2Q96G03 612 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 SGSM3Q96HU1 749 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 PCYOX1Q9UHG3 505 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 DNPEPQ9ULA0 475 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 CHMP2BQ9UQN3 213 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 COL4A1P02462 1669 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 ZNF862O60290 1169 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 RBP3P10745 1247 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 ETS1P14921 441 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 PDGFRAP16234 1089 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 SNX16P57768 344 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 RPL7AP62424 266 aaKnown RBP10.29□□□□□ -0.76
CSTF1-201ENST00000217109 CENPCQ03188 943 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 LY6KQ17RY6 165 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 TDRD10Q5VZ19 366 aaKnown RBP10.29□□□□□ -0.76
CSTF1-201ENST00000217109 TTC13Q8NBP0 860 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 CLEC4DQ8WXI8 215 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 TSNARE1Q96NA8 513 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 ANKRD36CQ5JPF3 1778 aa10.29□□□□□ -0.76
CSTF1-201ENST00000217109 CAPN9O14815 690 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 ZC3H11AO75152 810 aaKnown RBP eCLIP10.28□□□□□ -0.76
CSTF1-201ENST00000217109 UBOX5O94941 541 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 CYP1A2P05177 515 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 NAMPTP43490 491 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 CDH8P55286 799 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 GRM1Q13255 1194 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 AUHQ13825 339 aaKnown RBP10.28□□□□□ -0.76
CSTF1-201ENST00000217109 ATF7IP2Q5U623 682 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 FKBP1CQ5VVH2 108 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 ATP11CQ8NB49 1132 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 RNF169Q8NCN4 708 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 SPATA18Q8TC71 538 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 ASAP3Q8TDY4 903 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 ERP27Q96DN0 273 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 MYCBPQ99417 103 aaPredicted RBP10.28□□□□□ -0.76
CSTF1-201ENST00000217109 TXLNGQ9NUQ3 528 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 ASNSD1Q9NWL6 643 aa10.28□□□□□ -0.76
CSTF1-201ENST00000217109 MAP3K20Q9NYL2 800 aaKnown RBP10.28□□□□□ -0.76
CSTF1-201ENST00000217109 R3HDM2Q9Y2K5 976 aaKnown RBP10.28□□□□□ -0.76
CSTF1-201ENST00000217109 STXBP5LQ9Y2K9 1186 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms