RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TRABD2AQ86V40 505 aa14.08□□□□□ -0.15
SRP54-201ENST00000216774 NSUN6Q8TEA1 469 aaKnown RBP14.08□□□□□ -0.15
SRP54-201ENST00000216774 N4BP2L2Q92802 583 aaPredicted RBP14.08□□□□□ -0.15
SRP54-201ENST00000216774 TBC1D31Q96DN5 1066 aa14.08□□□□□ -0.15
SRP54-201ENST00000216774 SLITRK1Q96PX8 696 aa14.08□□□□□ -0.15
SRP54-201ENST00000216774 FAM118BQ9BPY3 351 aa14.08□□□□□ -0.15
SRP54-201ENST00000216774 PITPNM3Q9BZ71 974 aa14.08□□□□□ -0.15
SRP54-201ENST00000216774 VPS33BQ9H267 617 aa14.08□□□□□ -0.15
SRP54-201ENST00000216774 RPAP3Q9H6T3 665 aaPredicted RBP14.08□□□□□ -0.15
SRP54-201ENST00000216774 RBAKQ9NYW8 714 aaPredicted RBP14.08□□□□□ -0.15
SRP54-201ENST00000216774 SLC9A2Q9UBY0 812 aa14.08□□□□□ -0.15
SRP54-201ENST00000216774 DRG1Q9Y295 367 aaKnown RBP14.08□□□□□ -0.15
SRP54-201ENST00000216774 USTQ9Y2C2 406 aa14.08□□□□□ -0.15
SRP54-201ENST00000216774 ASMTLO95671 621 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 MMP8P22894 467 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 FOXN2P32314 431 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 WNT7BP56706 349 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 MORF4L2Q15014 288 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 RASA2Q15283 850 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 CCDC142Q17RM4 750 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 XKR3Q5GH77 459 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 CYP4F22Q6NT55 531 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 ABHD15Q6UXT9 468 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 CCDC60Q8IWA6 550 aaPredicted RBP14.08□□□□□ -0.16
SRP54-201ENST00000216774 ALLCQ8N6M5 410 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 RMDN2Q96LZ7 410 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 CGRRF1Q99675 332 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 SAYSD1Q9NPB0 183 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 SMG5Q9UPR3 1016 aaKnown RBP14.08□□□□□ -0.16
SRP54-201ENST00000216774 STARD13Q9Y3M8 1113 aa14.08□□□□□ -0.16
SRP54-201ENST00000216774 TMEM191CA6NGB0 347 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 TMEM191BP0C7N4 346 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 GCAP28676 217 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 GJC1P36383 396 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 ACOT2P49753 483 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 WDR4P57081 412 aaKnown RBP14.07□□□□□ -0.16
SRP54-201ENST00000216774 ACTR2P61160 394 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 DGKZQ13574 1117 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 MTMR2Q13614 643 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 EMC2Q15006 297 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 SEPT14Q6ZU15 432 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 FBF1Q8TES7 1133 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 L3MBTL3Q96JM7 780 aaPredicted RBP14.07□□□□□ -0.16
SRP54-201ENST00000216774 ZNF277Q9NRM2 450 aaPredicted RBP14.07□□□□□ -0.16
SRP54-201ENST00000216774 PNMA3Q9UL41 463 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 DNPEPQ9ULA0 475 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 ZNRF3Q9ULT6 936 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 ZNF148Q9UQR1 794 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 LOC102724159A0A0B4J2E5 919 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 STAM2O75886 525 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 RGS20O76081 388 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 LSM8O95777 96 aaKnown RBP14.07□□□□□ -0.16
SRP54-201ENST00000216774 CALB1P05937 261 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 CCND1P24385 295 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 ZNF132P52740 706 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 NOP14P78316 857 aaKnown RBP14.07□□□□□ -0.16
SRP54-201ENST00000216774 MGAT5Q09328 741 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 SPARCL1Q14515 664 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 PWP2Q15269 919 aaKnown RBP14.07□□□□□ -0.16
SRP54-201ENST00000216774 ECHDC2Q86YB7 292 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 TTLL6Q8N841 843 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 DENND1AQ8TEH3 1009 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 FHDC1Q9C0D6 1143 aaPredicted RBP14.07□□□□□ -0.16
SRP54-201ENST00000216774 TXLNGQ9NUQ3 528 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 SHOC2Q9UQ13 582 aa14.07□□□□□ -0.16
SRP54-201ENST00000216774 ATP5HO75947 161 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 UNC5CO95185 931 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 KRT1P04264 644 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 KRT16P08779 473 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 HSPA1LP34931 641 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 MSH2P43246 934 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 NAMPTP43490 491 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 ARSEP51690 589 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 POLGP54098 1239 aaPredicted RBP14.06□□□□□ -0.16
SRP54-201ENST00000216774 OAZ1P54368 228 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 AGAP11Q8TF27 550 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 NKD2Q969F2 451 aaPredicted RBP14.06□□□□□ -0.16
SRP54-201ENST00000216774 STAMBPL1Q96FJ0 436 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 TEPSINQ96N21 525 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 PORCNQ9H237 461 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 RIPK3Q9Y572 518 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 NUB1Q9Y5A7 615 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 ZNF541Q9H0D2 1346 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 FER1L6Q2WGJ9 1857 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 A0A0B4J269 797 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 ALOX15BO15296 676 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 ITGAVP06756 1048 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 PECAM1P16284 738 aaPredicted RBP14.06□□□□□ -0.16
SRP54-201ENST00000216774 VCPP55072 806 aaKnown RBP14.06□□□□□ -0.16
SRP54-201ENST00000216774 TAP1Q03518 808 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 TNFAIP1Q13829 316 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 SETDB1Q15047 1291 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 MTERF2Q49AM1 385 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 MFSD7Q6UXD7 560 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 SPOCD1Q6ZMY3 1216 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 PRUNE1Q86TP1 453 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 ZNF606Q8WXB4 792 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 ATG4CQ96DT6 458 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 RSRC1Q96IZ7 334 aaKnown RBP14.06□□□□□ -0.16
SRP54-201ENST00000216774 RAB3IPQ96QF0 476 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms