RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 UBR7Q8N806 425 aa13.65□□□□□ -0.22
RIPK3-201ENST00000216274 ARRDC4Q8NCT1 418 aa13.65□□□□□ -0.22
RIPK3-201ENST00000216274 MAIP1Q8WWC4 291 aa13.65□□□□□ -0.22
RIPK3-201ENST00000216274 ZBTB9Q96C00 473 aa13.65□□□□□ -0.22
RIPK3-201ENST00000216274 BTBD6Q96KE9 485 aa13.65□□□□□ -0.22
RIPK3-201ENST00000216274 PKNOX2Q96KN3 472 aa13.65□□□□□ -0.22
RIPK3-201ENST00000216274 NLRP4Q96MN2 994 aa13.65□□□□□ -0.22
RIPK3-201ENST00000216274 NIF3L1Q9GZT8 377 aa13.65□□□□□ -0.22
RIPK3-201ENST00000216274 MRPL47Q9HD33 250 aaKnown RBP13.65□□□□□ -0.22
RIPK3-201ENST00000216274 PRMT7Q9NVM4 692 aaPredicted RBP13.65□□□□□ -0.22
RIPK3-201ENST00000216274 CHORDC1Q9UHD1 332 aaPredicted RBP13.65□□□□□ -0.22
RIPK3-201ENST00000216274 SCINQ9Y6U3 715 aa13.65□□□□□ -0.22
RIPK3-201ENST00000216274 COL1A2P08123 1366 aa13.65□□□□□ -0.22
RIPK3-201ENST00000216274 RBM47A0AV96 593 aaKnown RBP13.64□□□□□ -0.23
RIPK3-201ENST00000216274 TTLL13PA6NNM8 815 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 INO80B-WBP1J3KQ70 363 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 DNM1LO00429 736 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 DAPK3O43293 454 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 DUSP11O75319 330 aaKnown RBP13.64□□□□□ -0.23
RIPK3-201ENST00000216274 TMEM191BP0C7N4 346 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 PHKA2P46019 1235 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 ZNF132P52740 706 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 NOMO3P69849 1222 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
RIPK3-201ENST00000216274 TRADDQ15628 312 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 SLC13A5Q86YT5 568 aaPredicted RBP13.64□□□□□ -0.23
RIPK3-201ENST00000216274 C1orf131Q8NDD1 294 aaKnown RBP13.64□□□□□ -0.23
RIPK3-201ENST00000216274 CPA5Q8WXQ8 436 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 MAGOHBQ96A72 148 aaKnown RBP13.64□□□□□ -0.23
RIPK3-201ENST00000216274 CYFIP2Q96F07 1278 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 ANKRD36BP1Q96IX9 119 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 ERP44Q9BS26 406 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 INO80BQ9C086 356 aaPredicted RBP13.64□□□□□ -0.23
RIPK3-201ENST00000216274 PDGFCQ9NRA1 345 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 LCMT1Q9UIC8 334 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 TNFSF13BQ9Y275 285 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.64□□□□□ -0.23
RIPK3-201ENST00000216274 MYO1FO00160 1098 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 PODXLO00592 558 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 B4GALT4O60513 344 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 C22orf31O95567 290 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 CALCAP01258 141 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 PYGMP11217 842 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 RRM1P23921 792 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 MNX1P50219 401 aaPredicted RBP13.64□□□□□ -0.23
RIPK3-201ENST00000216274 DRG2P55039 364 aaKnown RBP13.64□□□□□ -0.23
RIPK3-201ENST00000216274 NKX3-2P78367 333 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 TNFAIP2Q03169 654 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 CYP1B1Q16678 543 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 DUPD1Q68J44 220 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 IQSEC1Q6DN90 963 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 LEKR1Q6ZMV7 388 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 NECAB2Q7Z6G3 386 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 ADAT2Q7Z6V5 191 aaKnown RBP13.64□□□□□ -0.23
RIPK3-201ENST00000216274 DDX42Q86XP3 938 aaKnown RBP eCLIP13.64□□□□□ -0.23
RIPK3-201ENST00000216274 JAMLQ86YT9 394 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 TRAPPC12Q8WVT3 735 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 EMID1Q96A84 441 aaPredicted RBP13.64□□□□□ -0.23
RIPK3-201ENST00000216274 FAM212AQ96EL1 285 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 CELF4Q9BZC1 486 aaKnown RBP13.64□□□□□ -0.23
RIPK3-201ENST00000216274 MTMR12Q9C0I1 747 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 ZMYND15Q9H091 742 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 PTPRHQ9HD43 1115 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 ERVK-5Q9HDB9 667 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 ADAM22Q9P0K1 906 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 PCYOX1Q9UHG3 505 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 NR2E1Q9Y466 385 aa13.64□□□□□ -0.23
RIPK3-201ENST00000216274 UMODL1Q5DID0 1318 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 MROH7Q68CQ1 1323 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 ERICH4A6NGS2 130 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 PROSCO94903 275 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 LSM8O95777 96 aaKnown RBP13.63□□□□□ -0.23
RIPK3-201ENST00000216274 LGALS2P05162 132 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 FNTAP49354 379 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 CLCN3P51790 818 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 MBTD1Q05BQ5 628 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 PTP4A2Q12974 167 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 KYAT1Q16773 422 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 FAM187BQ17R55 369 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 SPDYCQ5MJ68 293 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 TAPT1Q6NXT6 567 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
RIPK3-201ENST00000216274 PRELID2Q8N945 189 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 C12orf50Q8NA57 414 aaPredicted RBP13.63□□□□□ -0.23
RIPK3-201ENST00000216274 PPTC7Q8NI37 304 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 TRIM51Q9BSJ1 452 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 DPH5Q9H2P9 285 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 RPF1Q9H9Y2 349 aaKnown RBP13.63□□□□□ -0.23
RIPK3-201ENST00000216274 XPNPEP3Q9NQH7 507 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 PARP2Q9UGN5 583 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 Q9Y3F1 56 aa13.63□□□□□ -0.23
RIPK3-201ENST00000216274 GOLGA6L10A6NI86 522 aa13.62□□□□□ -0.23
RIPK3-201ENST00000216274 PTGIRP43119 386 aa13.62□□□□□ -0.23
RIPK3-201ENST00000216274 MYL6P60660 151 aa13.62□□□□□ -0.23
RIPK3-201ENST00000216274 TFAMQ00059 246 aaKnown RBP13.62□□□□□ -0.23
RIPK3-201ENST00000216274 ZNF699Q32M78 642 aa13.62□□□□□ -0.23
RIPK3-201ENST00000216274 AADACL2Q6P093 401 aa13.62□□□□□ -0.23
RIPK3-201ENST00000216274 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.62□□□□□ -0.23
RIPK3-201ENST00000216274 PIK3R5Q8WYR1 880 aa13.62□□□□□ -0.23
RIPK3-201ENST00000216274 FAXDC2Q96IV6 333 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms