RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 IKBKEQ14164 716 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 SV2CQ496J9 727 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 GLYCTKQ8IVS8 523 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 CRIPAKQ8N1N5 446 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 TTC39CQ8N584 583 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 LNX1Q8TBB1 728 aaPredicted RBP17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 DDX1Q92499 740 aaKnown RBP17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 KANSL3Q9P2N6 904 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 NAGPAQ9UK23 515 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 PCDHA13Q9Y5I0 950 aa17.05■□□□□ 0.32
SNRPD3-201ENST00000215829 TTC3P53804 2025 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 GOLGA6L9A6NEM1 432 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 PODXLO00592 558 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 SPTLC1O15269 473 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 CHRNB2P17787 502 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 CLCNKBP51801 687 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 CDR2Q01850 454 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 TUSC3Q13454 348 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 UPP1Q16831 310 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 NOMO2Q5JPE7 1267 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 C10orf76Q5T2E6 689 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 MFSD5Q6N075 450 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 RPUSD2Q8IZ73 545 aaKnown RBP17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 URGCPQ8TCY9 931 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 DDX27Q96GQ7 796 aaKnown RBP17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 LRFN2Q9ULH4 789 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 NENFQ9UMX5 172 aa17.04■□□□□ 0.32
SNRPD3-201ENST00000215829 CASTOR2A6NHX0 329 aa17.03■□□□□ 0.32
SNRPD3-201ENST00000215829 CILPO75339 1184 aa17.03■□□□□ 0.32
SNRPD3-201ENST00000215829 MAGEA1P43355 309 aa17.03■□□□□ 0.32
SNRPD3-201ENST00000215829 INCA1Q0VD86 236 aa17.03■□□□□ 0.32
SNRPD3-201ENST00000215829 ALKBH5Q6P6C2 394 aaKnown RBP17.03■□□□□ 0.32
SNRPD3-201ENST00000215829 ZNF662Q6ZS27 426 aa17.03■□□□□ 0.32
SNRPD3-201ENST00000215829 ZNF677Q86XU0 584 aa17.03■□□□□ 0.32
SNRPD3-201ENST00000215829 TMEM199Q8N511 208 aa17.03■□□□□ 0.32
SNRPD3-201ENST00000215829 UROC1Q96N76 676 aa17.03■□□□□ 0.32
SNRPD3-201ENST00000215829 CACNG4Q9UBN1 327 aa17.03■□□□□ 0.32
SNRPD3-201ENST00000215829 MKI67P46013 3256 aaKnown RBP17.03■□□□□ 0.32
SNRPD3-201ENST00000215829 A0A0U1RQJ8 604 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 CALCAP01258 141 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 MMEP08473 750 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 CSF2RAP15509 400 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 GNA15P30679 374 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 VAV2P52735 878 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 FMO1Q01740 532 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 SOWAHAQ2M3V2 549 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 ZNF394Q53GI3 561 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 CCDC122Q5T0U0 273 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 TAF3Q5VWG9 929 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 LIMS2Q7Z4I7 341 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 KIAA1328Q86T90 577 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 WHAMMQ8TF30 809 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 ATRIPQ8WXE1 791 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 LUC7LQ9NQ29 371 aaKnown RBP17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 BARX2Q9UMQ3 279 aaPredicted RBP17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 MICAL3Q7RTP6 2002 aa17.02■□□□□ 0.32
SNRPD3-201ENST00000215829 HOXA2O43364 376 aa17.02■□□□□ 0.31
SNRPD3-201ENST00000215829 RAD23BP54727 409 aa17.02■□□□□ 0.31
SNRPD3-201ENST00000215829 DPH6Q7L8W6 267 aa17.02■□□□□ 0.31
SNRPD3-201ENST00000215829 NPAS4Q8IUM7 802 aa17.02■□□□□ 0.31
SNRPD3-201ENST00000215829 ABI1Q8IZP0 508 aa17.02■□□□□ 0.31
SNRPD3-201ENST00000215829 PAAF1Q9BRP4 392 aa17.02■□□□□ 0.31
SNRPD3-201ENST00000215829 SEPT11Q9NVA2 429 aaKnown RBP17.02■□□□□ 0.31
SNRPD3-201ENST00000215829 TBC1D13Q9NVG8 400 aa17.02■□□□□ 0.31
SNRPD3-201ENST00000215829 ABHD14A-ACY1A0A1B0GW23 586 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 TACC1O75410 805 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 PAEPP09466 180 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 FAM163BP0C2L3 166 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 IGFBP6P24592 240 aaPredicted RBP17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 ARHGAP25P42331 645 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 DSC1Q08554 894 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 ZNF280BQ86YH2 543 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 TXLNBQ8N3L3 684 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 TOP6BLQ8N6T0 577 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 APPL2Q8NEU8 664 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 ZNF606Q8WXB4 792 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 RSPH1Q8WYR4 309 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 TMEM176AQ96HP8 235 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 CASD1Q96PB1 797 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 PCDHB18PQ96TA0 734 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 MRPL45Q9BRJ2 306 aaKnown RBP17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 LZTFL1Q9NQ48 299 aa17.01■□□□□ 0.31
SNRPD3-201ENST00000215829 RCCD1A6NED2 376 aa17■□□□□ 0.31
SNRPD3-201ENST00000215829 CYB561D2O14569 222 aa17■□□□□ 0.31
SNRPD3-201ENST00000215829 HUS1O60921 280 aa17■□□□□ 0.31
SNRPD3-201ENST00000215829 DDHD2O94830 711 aa17■□□□□ 0.31
SNRPD3-201ENST00000215829 PFKMP08237 780 aa17■□□□□ 0.31
SNRPD3-201ENST00000215829 GZMAP12544 262 aa17■□□□□ 0.31
SNRPD3-201ENST00000215829 PAX3P23760 479 aa17■□□□□ 0.31
SNRPD3-201ENST00000215829 NDST1P52848 882 aa17■□□□□ 0.31
SNRPD3-201ENST00000215829 RNASELQ05823 741 aaKnown RBP17■□□□□ 0.31
SNRPD3-201ENST00000215829 ARHGAP29Q52LW3 1261 aa17■□□□□ 0.31
SNRPD3-201ENST00000215829 DCLRE1AQ6PJP8 1040 aa17■□□□□ 0.31
SNRPD3-201ENST00000215829 PALB2Q86YC2 1186 aa17■□□□□ 0.31
SNRPD3-201ENST00000215829 COLGALT2Q8IYK4 626 aa17■□□□□ 0.31
SNRPD3-201ENST00000215829 SLC4A11Q8NBS3 891 aa17■□□□□ 0.31
SNRPD3-201ENST00000215829 C3orf58Q8NDZ4 430 aa17■□□□□ 0.31
SNRPD3-201ENST00000215829 RABGGTAQ92696 567 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms