RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 CEP350Q5VT06 3117 aa16.64■□□□□ 0.25
LAPTM4A-201ENST00000175091 KCNK3O14649 394 aa16.64■□□□□ 0.25
LAPTM4A-201ENST00000175091 CILPO75339 1184 aa16.64■□□□□ 0.25
LAPTM4A-201ENST00000175091 LSM8O95777 96 aaKnown RBP16.64■□□□□ 0.25
LAPTM4A-201ENST00000175091 MYCNP04198 464 aaPredicted RBP16.64■□□□□ 0.25
LAPTM4A-201ENST00000175091 CTSHP09668 335 aa16.64■□□□□ 0.25
LAPTM4A-201ENST00000175091 AKAP5P24588 427 aa16.64■□□□□ 0.25
LAPTM4A-201ENST00000175091 BRD2P25440 801 aaKnown RBP16.64■□□□□ 0.25
LAPTM4A-201ENST00000175091 INCA1Q0VD86 236 aa16.64■□□□□ 0.25
LAPTM4A-201ENST00000175091 CFAP221Q4G0U5 840 aa16.64■□□□□ 0.25
LAPTM4A-201ENST00000175091 SMG8Q8ND04 991 aaKnown RBP16.64■□□□□ 0.25
LAPTM4A-201ENST00000175091 SMARCAL1Q9NZC9 954 aa16.64■□□□□ 0.25
LAPTM4A-201ENST00000175091 RPS6KA5O75582 802 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 CABYRO75952 493 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 CHRNA1P02708 482 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 INHAP05111 366 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 PAEPP09466 180 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 CDH5P33151 784 aaPredicted RBP16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 PAFAH1B1P43034 410 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 RAD23BP54727 409 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 CDH8P55286 799 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 C2orf54Q08AI8 447 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 GLRA4Q5JXX5 417 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 TWF2Q6IBS0 349 aaKnown RBP16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 SLAIN1Q8ND83 568 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 SPATA4Q8NEY3 305 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 BEST2Q8NFU1 509 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 WHAMMQ8TF30 809 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 TFAP2BQ92481 460 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 MS4A14Q96JA4 679 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 VCPIP1Q96JH7 1222 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 PBKQ96KB5 322 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 TSPAN18Q96SJ8 248 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 APOL6Q9BWW8 343 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 HMGXB4Q9UGU5 601 aa16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 UBQLN1Q9UMX0 589 aaKnown RBP16.63■□□□□ 0.25
LAPTM4A-201ENST00000175091 KCNE1P15382 129 aa16.62■□□□□ 0.25
LAPTM4A-201ENST00000175091 RRM1P23921 792 aa16.62■□□□□ 0.25
LAPTM4A-201ENST00000175091 C1QBPQ07021 282 aaKnown RBP16.62■□□□□ 0.25
LAPTM4A-201ENST00000175091 MYO1EQ12965 1108 aa16.62■□□□□ 0.25
LAPTM4A-201ENST00000175091 PTP4A2Q12974 167 aa16.62■□□□□ 0.25
LAPTM4A-201ENST00000175091 PTGISQ16647 500 aa16.62■□□□□ 0.25
LAPTM4A-201ENST00000175091 PDCL2Q8N4E4 241 aa16.62■□□□□ 0.25
LAPTM4A-201ENST00000175091 LRRC52Q8N7C0 313 aa16.62■□□□□ 0.25
LAPTM4A-201ENST00000175091 C18orf25Q96B23 403 aaPredicted RBP16.62■□□□□ 0.25
LAPTM4A-201ENST00000175091 TWNKQ96RR1 684 aa16.62■□□□□ 0.25
LAPTM4A-201ENST00000175091 C11orf70Q9BRQ4 267 aa16.62■□□□□ 0.25
LAPTM4A-201ENST00000175091 RNF39Q9H2S5 420 aa16.62■□□□□ 0.25
LAPTM4A-201ENST00000175091 SAGE1Q9NXZ1 904 aa16.62■□□□□ 0.25
LAPTM4A-201ENST00000175091 PPEF2O14830 753 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 DDX3YO15523 660 aaKnown RBP16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 FKTNO75072 461 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 SSTR3P32745 418 aaPredicted RBP16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 ACLYP53396 1101 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 TNNC1P63316 161 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 PTPN11Q06124 597 aaPredicted RBP16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 SLC4A11Q8NBS3 891 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 ZNF296Q8WUU4 475 aaPredicted RBP16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 PARD6BQ9BYG5 372 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 ST3GAL5Q9UNP4 418 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 ALG6Q9Y672 507 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 SMIM28A0A1B0GU29 152 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 MOXD2PA6NHM9 499 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 MMP8P22894 467 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 HTRA3P83110 453 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 ITGA7Q13683 1181 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 RASGEF1CQ8N431 466 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 MMGT1Q8N4V1 131 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 TTC39CQ8N584 583 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 ARRDC4Q8NCT1 418 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 C1orf131Q8NDD1 294 aaKnown RBP16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 ACTRT1Q8TDG2 376 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 UBE2Q2Q8WVN8 375 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 RPS6KC1Q96S38 1066 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 PNKPQ96T60 521 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 ZNF518BQ9C0D4 1074 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 ELOVL4Q9GZR5 314 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 CARD9Q9H257 536 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 ADAM22Q9P0K1 906 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 PARP2Q9UGN5 583 aa16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 BARX2Q9UMQ3 279 aaPredicted RBP16.61■□□□□ 0.25
LAPTM4A-201ENST00000175091 MIF4GDA9UHW6 222 aaKnown RBP16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 XPOTO43592 962 aaKnown RBP16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 RHOXF2BP0C7M4 288 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 THPOP40225 353 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 PRMT2P55345 433 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 PTK7Q13308 1070 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 MESDQ14696 234 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 C2CD6Q53TS8 623 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 DCAF12L1Q5VU92 463 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 C9orf57Q5W0N0 161 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 LHX8Q68G74 356 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 MMS22LQ6ZRQ5 1243 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 USP38Q8NB14 1042 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 TMEM35BQ8NCS4 154 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 CD101Q93033 1021 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 RHOXF2Q9BQY4 288 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 CHST12Q9NRB3 414 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 ARGLU1Q9NWB6 273 aaPredicted RBP16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 KLK14Q9P0G3 267 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms